CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01384	Canola	cytosol	89.09	99.77
CDX96645	Canola	cytosol	99.38	99.38
CDY51327	Canola	cytosol	99.18	99.18
CDY54328	Canola	cytosol	99.18	99.18
CDY29363	Canola	cytosol	98.56	98.56
AT1G20260.1	Thale cress	cytosol	97.74	97.54
CDX87646	Canola	cytosol	97.33	96.93
CDX73218	Canola	cytosol	96.09	96.69
PGSC0003DMT400068704	Potato	cytosol	94.24	95.62
Solyc10g055670.1.1	Tomato	cytosol, nucleus, unclear	94.24	95.62
Solyc01g111760.2.1	Tomato	plastid	93.83	95.2
TraesCS6D01G173400.1	Wheat	cytosol, nucleus, plastid, unclear	94.65	94.26
TraesCS6B01G218100.1	Wheat	cytosol	94.65	94.26
TraesCS6A01G186300.1	Wheat	cytosol	94.65	94.26
KXG20226	Sorghum	cytosol	94.24	94.05
Zm00001d036961_P004	Maize	plasma membrane, plastid	94.24	94.05
TraesCS7D01G361000.1	Wheat	cytosol	94.24	93.85
Os06t0568200-01	Rice	nucleus, plasma membrane, vacuole	94.24	93.85
TraesCS7A01G362000.1	Wheat	cytosol	94.24	93.85
TraesCS7B01G265500.1	Wheat	golgi, nucleus, plastid	94.24	93.85
VIT_03s0038g02760.t01	Wine grape	cytosol	94.03	93.65
Zm00001d046336_P001	Maize	cytosol	94.44	92.17
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	94.65	91.45
HORVU7Hr1G087190.1	Barley	plastid	94.44	87.1
PGSC0003DMT400008800	Potato	cytosol	93.62	86.83
HORVU6Hr1G039890.3	Barley	mitochondrion	94.86	84.74
CDX99333	Canola	mitochondrion	18.31	39.21
CDX69928	Canola	cytosol	19.55	21.16
CDY44784	Canola	cytosol	19.55	21.16
CDY21559	Canola	cytosol	19.55	21.16
CDY67023	Canola	cytosol	21.81	20.91
CDX87424	Canola	cytosol	25.51	19.9
CDX88489	Canola	cytosol	25.51	19.9
CDY57944	Canola	cytosol	25.31	19.74
CDX79274	Canola	cytosol	25.31	19.74
CDY44783	Canola	mitochondrion	20.99	18.44
CDY21558	Canola	mitochondrion	20.99	18.44
CDX69929	Canola	mitochondrion	20.99	18.41
CDX78350	Canola	mitochondrion	20.99	18.41
CDX81118	Canola	mitochondrion	20.99	18.38
CDY40736	Canola	cytosol	20.99	18.38
CDY40737	Canola	mitochondrion	20.99	18.38
CDX81119	Canola	mitochondrion	20.99	18.35
CDX78351	Canola	mitochondrion	20.99	18.35
CDY17918	Canola	cytosol	10.7	16.35
CDY17919	Canola	cytosol	4.94	16.33
CDY21198	Canola	cytosol	7.61	16.02
CDX99946	Canola	plastid	19.55	15.81
CDX98579	Canola	plastid	19.55	15.81
CDY38701	Canola	plastid	19.55	15.81
CDX77882	Canola	mitochondrion	3.91	8.8

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:24.1.1.2.2	Gene3D:3.40.50.12240	GO:A0A078H3B1	UniProt:A0A078H3B1
InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_V1-cplx_bsu	InterPro:ATPase_a/bsu_AS	EnsemblPlants:CDY31899	ProteinID:CDY31899
ProteinID:CDY31899.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015991
GO:GO:0015992	GO:GO:0016020	GO:GO:0033180	GO:GO:0046034	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00050647001
HAMAP:MF_00310	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PIRSF:PIRSF039114	ScanProsite:PS00152
PANTHER:PTHR43389	PANTHER:PTHR43389:SF6	MetaCyc:PWY-7219	SUPFAM:SSF52540	TIGRFAMs:TIGR01040	UniParc:UPI0004EE43F6
InterPro:V-ATPase_su_B/beta	:	:	:	:	:

Description

BnaC07g15490DBnaC07g15490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3B1]

Coordinates

chrLK032281:-:453561..456980

Molecular Weight (calculated)

54053.7 Da

IEP (calculated)

4.774

GRAVY (calculated)

-0.252

Length

486 amino acids

Sequence
(BLAST)

001: MGAAGIDMDE GALEIGMEYR TVSGVAGPLV ILEKVKGPKY QEIVNIRLGD GSMRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSQDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK TENPIEDHGE
201: DNFAIVFAAM GVNMETAQFF KRDFEENGSM ERVTLFLNLA NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP
301: GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP TPDLTGYITE GQIYIDRQLH NRQIYPPINV LPSLSRLMKS AIGEGMTRRD HSDVSNQLYA
401: NYAIGKDVQA MKAVVGEEAL SSEDLLYLEF LDKFERKFVM QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY SRDSTS

Best Arabidopsis Sequence Match ( AT1G76030.1 )
(BLAST)

001: MGTNDLDIEE GTLEIGMEYR TVSGVAGPLV ILDKVKGPKY QEIVNIRLGD GSTRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSLDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK TVDLLEDHGE
201: DNFAIVFAAM GVNMETAQFF KRDFEENGSM ERVTLFLNLA NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP
301: GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP TPDLTGYITE GQIYIDRQLH NRQIYPPINV LPSLSRLMKS AIGEGMTRKD HSDVSNQLYA
401: NYAIGKDVQA MKAVVGEEAL SSEDLLYLEF LDKFERKFVM QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY SRDSTS

Arabidopsis Description

VHA-B1V-type proton ATPase subunit B1 [Source:UniProtKB/Swiss-Prot;Acc:P11574]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.