CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57944	Canola	cytosol	100.0	100.0
CDX88489	Canola	cytosol	99.04	99.04
CDX87424	Canola	cytosol	99.04	99.04
CDY67023	Canola	cytosol	80.1	98.42
AT1G78900.1	Thale cress	cytosol	97.75	97.75
VIT_09s0054g00890.t01	Wine grape	extracellular	94.22	94.22
KRH46991	Soybean	nucleus	94.22	94.22
PGSC0003DMT400068136	Potato	cytosol	94.22	94.22
Solyc06g063330.2.1	Tomato	cytosol, unclear	94.06	94.06
KRH44667	Soybean	nucleus	94.06	94.06
Solyc12g055800.1.1	Tomato	plastid	93.9	93.9
PGSC0003DMT400074197	Potato	cytosol	93.58	93.58
GSMUA_Achr1P10520_001	Banana	plasma membrane	90.85	91.14
GSMUA_Achr11P...	Banana	cytosol	90.69	90.98
GSMUA_Achr9P23040_001	Banana	cytosol	90.53	90.82
CDX77882	Canola	mitochondrion	12.84	37.04
CDX73218	Canola	cytosol	20.06	25.88
CDX87646	Canola	cytosol	20.06	25.61
CDY44784	Canola	cytosol	18.46	25.61
CDY21559	Canola	cytosol	18.46	25.61
CDX69928	Canola	cytosol	18.46	25.61
CDY01384	Canola	cytosol	17.82	25.58
CDY29363	Canola	cytosol	19.9	25.51
CDX96645	Canola	cytosol	19.74	25.31
CDY54328	Canola	cytosol	19.74	25.31
CDY51327	Canola	cytosol	19.74	25.31
CDY31899	Canola	cytosol	19.74	25.31
CDY44783	Canola	mitochondrion	19.58	22.06
CDY21558	Canola	mitochondrion	19.58	22.06
CDX78350	Canola	mitochondrion	19.58	22.02
CDX69929	Canola	mitochondrion	19.58	22.02
CDY40737	Canola	mitochondrion	19.58	21.98
CDY40736	Canola	cytosol	19.58	21.98
CDX81118	Canola	mitochondrion	19.58	21.98
CDX78351	Canola	mitochondrion	19.58	21.94
CDX81119	Canola	mitochondrion	19.58	21.94
CDY17918	Canola	cytosol	10.59	20.75
CDY21198	Canola	cytosol	7.54	20.35
CDX98579	Canola	plastid	19.42	20.13
CDX99946	Canola	plastid	19.42	20.13
CDY38701	Canola	plastid	19.42	20.13
CDY17919	Canola	cytosol	4.17	17.69
CDX99333	Canola	mitochondrion	5.78	15.86

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	GO:A0A078J319	UniProt:A0A078J319	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	EnsemblPlants:CDX79274
ProteinID:CDX79274	ProteinID:CDX79274.1	ProteinID:CDY57944.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0015992
GO:GO:0016020	GO:GO:0016787	GO:GO:0033180	GO:GO:0046034	GO:GO:0046961	GO:GO:1902600
EnsemblPlantsGene:GSBRNA2T00131919001	InterPro:IPR023366	InterPro:IPR024034	HAMAP:MF_00309	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152	PANTHER:PTHR43607	PANTHER:PTHR43607:SF3	MetaCyc:PWY-7219
SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042	UniParc:UPI00025413F1	InterPro:V-ATPase_asu
SEG:seg	:	:	:	:	:

Description

BnaC06g20290DBnaA07g38430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J319]

Coordinates

chrLK031817:+:956247..960661

Molecular Weight (calculated)

68674.1 Da

IEP (calculated)

4.915

GRAVY (calculated)

-0.178

Length

623 amino acids

Sequence
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIAKRSGDVY IPRGVSVPAL DKDCPWEFQP NDFVEGDTIT GGDLYATVFE NTLMTHRVAL PPDAMGKITY IAPAGQYSLK DTVLELEFQG
201: VKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERDGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEAAL
601: VAKFKKLYED LSAGFRALED ETR

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.