Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 5.66 | 94.74 |
| Solyc12g042230.1.1 | Tomato | cytosol | 22.01 | 75.27 |
| PGSC0003DMT400002642 | Potato | cytosol | 86.16 | 67.16 |
| CDY38701 | Canola | plastid | 100.0 | 52.91 |
| CDX99946 | Canola | plastid | 100.0 | 52.91 |
| CDX98579 | Canola | plastid | 100.0 | 52.91 |
| GSMUA_Achr1P01800_001 | Banana | mitochondrion | 10.38 | 38.37 |
| CDX69928 | Canola | cytosol | 54.09 | 38.31 |
| CDY44784 | Canola | cytosol | 54.09 | 38.31 |
| CDY21559 | Canola | cytosol | 54.09 | 38.31 |
| CDY44783 | Canola | mitochondrion | 54.09 | 31.1 |
| CDY21558 | Canola | mitochondrion | 54.09 | 31.1 |
| CDX69929 | Canola | mitochondrion | 54.09 | 31.05 |
| CDX78350 | Canola | mitochondrion | 54.09 | 31.05 |
| CDX81118 | Canola | mitochondrion | 54.09 | 30.99 |
| CDY40737 | Canola | mitochondrion | 54.09 | 30.99 |
| CDY40736 | Canola | cytosol | 54.09 | 30.99 |
| CDX78351 | Canola | mitochondrion | 54.09 | 30.94 |
| CDX81119 | Canola | mitochondrion | 54.09 | 30.94 |
| CDY01384 | Canola | cytosol | 16.35 | 11.98 |
| CDX73218 | Canola | cytosol | 16.67 | 10.97 |
| CDY51327 | Canola | cytosol | 16.67 | 10.91 |
| CDY54328 | Canola | cytosol | 16.67 | 10.91 |
| CDX87646 | Canola | cytosol | 16.67 | 10.86 |
| CDY29363 | Canola | cytosol | 16.35 | 10.7 |
| CDY31899 | Canola | cytosol | 16.35 | 10.7 |
| CDX96645 | Canola | cytosol | 16.35 | 10.7 |
| CDX87424 | Canola | cytosol | 20.75 | 10.59 |
| CDX79274 | Canola | cytosol | 20.75 | 10.59 |
| CDY57944 | Canola | cytosol | 20.75 | 10.59 |
| CDX88489 | Canola | cytosol | 20.75 | 10.59 |
| CDX77882 | Canola | mitochondrion | 6.6 | 9.72 |
| CDY67023 | Canola | cytosol | 14.47 | 9.07 |
| CDX99333 | Canola | mitochondrion | 1.57 | 2.2 |
| CDY21198 | Canola | cytosol | 0.0 | 0.0 |
| CDY17919 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 | Gene3D:1.10.1140.10 | Gene3D:2.60.15.10 | Gene3D:3.40.50.300 | MapMan:35.1 |
| GO:A0A078FZV1 | UniProt:A0A078FZV1 | InterPro:ATP_synth_F1_dsu/esu_C | InterPro:ATP_synth_F1_dsu/esu_N | InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd | InterPro:ATPase_F1/V1_b/a_C |
| InterPro:ATPase_a/bsu_AS | InterPro:ATPsynth_dsu/esu_N | EnsemblPlants:CDY17918 | ProteinID:CDY17918 | ProteinID:CDY17918.1 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0045261 | GO:GO:0046933 | GO:GO:0099132 |
| EnsemblPlantsGene:GSBRNA2T00002266001 | InterPro:IPR024034 | InterPro:IPR036771 | InterPro:P-loop_NTPase | PFAM:PD000944 | PFAM:PF00006 |
| PFAM:PF00401 | PFAM:PF02823 | ScanProsite:PS00152 | PANTHER:PTHR15184 | PANTHER:PTHR15184:SF43 | MetaCyc:PWY-7219 |
| SUPFAM:SSF47917 | SUPFAM:SSF51344 | SUPFAM:SSF52540 | UniParc:UPI0004EEF938 | : | : |
Description
BnaC04g03010DBnaC04g03010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZV1]
Coordinates
chrLK032079:-:484146..485272
Molecular Weight (calculated)
34961.6 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.187
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEYFRDVNE QDVLLFIDNI FRFVQAGSEV SALLGRMPSA VGYQPTLSTE MGSLQERITS TKKGSITSIQ AVYVPADDLT DPAPATTFAH LDATTVLSRG
101: LAAKGIYPAV DPLDSTSTML QPRIVGEEHY ETAQQVKQTL QRYKELQDII AILGLDELSE EDRLTVARAR KIERFLSQPF FVAEVFTGSP GKYVGLAETI
201: RGFNLILSGE FDSLPEQAFY LVGNIDEATA KATNLEMEKV KEIILSTNSG QIGVLPNHAP IATAVDIEKN SDIDPQEAQQ TLEIAEANLR KAEGKRQTIE
301: ANLALRRART RVEALNTI
101: LAAKGIYPAV DPLDSTSTML QPRIVGEEHY ETAQQVKQTL QRYKELQDII AILGLDELSE EDRLTVARAR KIERFLSQPF FVAEVFTGSP GKYVGLAETI
201: RGFNLILSGE FDSLPEQAFY LVGNIDEATA KATNLEMEKV KEIILSTNSG QIGVLPNHAP IATAVDIEKN SDIDPQEAQQ TLEIAEANLR KAEGKRQTIE
301: ANLALRRART RVEALNTI
001: MTLNLCVLTP NRIVWDSEVK EIILSTNSGQ IGVLANHAPI ATAVDIGILK IRLANQWLTM ALMGGFARIG NNEITILVND AEKNSDIDPQ EAQQTLEIAE
101: ANLRKAEGKR QTIEANLALR RARTRVEALN TI
101: ANLRKAEGKR QTIEANLALR RARTRVEALN TI
Arabidopsis Description
ATPEATP synthase epsilon chain, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P09468]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.