CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57944	Canola	cytosol	98.42	80.1
CDX79274	Canola	cytosol	98.42	80.1
CDX88489	Canola	cytosol	97.63	79.45
CDX87424	Canola	cytosol	97.63	79.45
Bra008385.1-P	Field mustard	cytosol	91.91	79.25
AT1G78900.1	Thale cress	cytosol	96.65	78.65
VIT_09s0054g00890.t01	Wine grape	extracellular	93.1	75.76
Solyc12g055800.1.1	Tomato	plastid	93.1	75.76
Solyc06g063330.2.1	Tomato	cytosol, unclear	93.1	75.76
PGSC0003DMT400068136	Potato	cytosol	93.1	75.76
PGSC0003DMT400074197	Potato	cytosol	92.7	75.44
KRH46991	Soybean	nucleus	92.7	75.44
KRH44667	Soybean	nucleus	92.5	75.28
GSMUA_Achr9P23040_001	Banana	cytosol	90.14	73.59
GSMUA_Achr1P10520_001	Banana	plasma membrane	90.14	73.59
GSMUA_Achr11P...	Banana	cytosol	89.55	73.11
CDX73218	Canola	cytosol	21.1	22.15
CDX87646	Canola	cytosol	21.1	21.93
CDY54328	Canola	cytosol	20.91	21.81
CDY51327	Canola	cytosol	20.91	21.81
CDX96645	Canola	cytosol	20.91	21.81
CDY31899	Canola	cytosol	20.91	21.81
CDY29363	Canola	cytosol	20.91	21.81
CDX69928	Canola	cytosol	19.13	21.6
CDY44784	Canola	cytosol	19.13	21.6
CDY21559	Canola	cytosol	19.13	21.6
CDY01384	Canola	cytosol	18.34	21.43
CDY21198	Canola	cytosol	9.27	20.35
CDY21558	Canola	mitochondrion	20.51	18.81
CDY44783	Canola	mitochondrion	20.51	18.81
CDX78350	Canola	mitochondrion	20.51	18.77
CDX69929	Canola	mitochondrion	20.51	18.77
CDY40736	Canola	cytosol	20.51	18.74
CDY40737	Canola	mitochondrion	20.51	18.74
CDX81118	Canola	mitochondrion	20.51	18.74
CDX81119	Canola	mitochondrion	20.51	18.7
CDX78351	Canola	mitochondrion	20.51	18.7
CDY17919	Canola	cytosol	5.13	17.69
CDY38701	Canola	plastid	19.92	16.81
CDX99946	Canola	plastid	19.92	16.81
CDX98579	Canola	plastid	19.92	16.81
CDX99333	Canola	mitochondrion	6.9	15.42
CDY17918	Canola	cytosol	9.07	14.47
CDX77882	Canola	mitochondrion	5.92	13.89

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:2.40.30.20	Gene3D:2.40.50.100	MapMan:24.1.1.2.1
Gene3D:3.40.50.300	GO:A0A078JHD3	UniProt:A0A078JHD3	InterPro:ATP-synth_a_Xtn	InterPro:ATP_synth_asu-like_sf	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_V1-cplx_asu	InterPro:ATPase_a/bsu_AS	EnsemblPlants:CDY67023
ProteinID:CDY67023	ProteinID:CDY67023.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787
GO:GO:0033180	GO:GO:0046034	GO:GO:0046961	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00058645001	InterPro:IPR023366
InterPro:IPR024034	InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF16886	ScanProsite:PS00152
PANTHER:PTHR43607	PANTHER:PTHR43607:SF3	MetaCyc:PWY-7219	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01042
UniParc:UPI0004EEE6CF	InterPro:V-ATPase_asu	SEG:seg	:	:	:

Description

BnaCnng53190DBnaCnng53190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHD3]

Coordinates

chrLK035683:-:139..3690

Molecular Weight (calculated)

55399.2 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.141

Length

507 amino acids

Sequence
(BLAST)

001: MPPFYAGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIAKRSGDVY IPRGVSVPAL DKDCPWEFQP NDFVEGDTIT GGDLYATVFE NTLMTHRVAL PPDAMGKITY IAPAGQYSLK DTVLELEFQG
201: VKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERDGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQVRV
501: TYPSKTI

Best Arabidopsis Sequence Match ( AT1G78900.1 )
(BLAST)

001: MPAFYGGKLT TFEDDEKESE YGYVRKVSGP VVVADGMAGA AMYELVRVGH DNLIGEIIRL EGDSATIQVY EETAGLTVND PVLRTHKPLS VELGPGILGN
101: IFDGIQRPLK TIARISGDVY IPRGVSVPAL DKDCLWEFQP NKFVEGDTIT GGDLYATVFE NTLMNHLVAL PPDAMGKITY IAPAGQYSLK DTVIELEFQG
201: IKKSYTMLQS WPVRTPRPVA SKLAADTPLL TGQRVLDALF PSVLGGTCAI PGAFGCGKTV ISQALSKYSN SDAVVYVGCG ERGNEMAEVL MDFPQLTMTL
301: PDGREESVMK RTTLVANTSN MPVAAREASI YTGITIAEYF RDMGYNVSMM ADSTSRWAEA LREISGRLAE MPADSGYPAY LAARLASFYE RAGKVKCLGG
401: PERNGSVTIV GAVSPPGGDF SDPVTSATLS IVQVFWGLDK KLAQRKHFPS VNWLISYSKY STALESFYEK FDPDFINIRT KAREVLQRED DLNEIVQLVG
501: KDALAEGDKI TLETAKLLRE DYLAQNAFTP YDKFCPFYKS VWMMRNIIHF YNLANQAVER AAGMDGQKIT YTLIKHRLGD LFYRLVSQKF EDPAEGEDTL
601: VEKFKKLYDD LNAGFRALED ETR

Arabidopsis Description

VHA-AVHA-A [Source:UniProtKB/TrEMBL;Acc:A0A178W720]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.