Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053765_P003 | Maize | cytosol | 89.17 | 17.23 |
| Bra008385.1-P | Field mustard | cytosol | 80.83 | 16.5 |
| GSMUA_Achr1P10520_001 | Banana | plasma membrane | 85.0 | 16.43 |
| GSMUA_Achr11P... | Banana | cytosol | 84.17 | 16.26 |
| GSMUA_Achr9P23040_001 | Banana | cytosol | 82.5 | 15.94 |
| Bra003633.1-P | Field mustard | cytosol | 80.0 | 15.41 |
| PGSC0003DMT400068136 | Potato | cytosol | 80.0 | 15.41 |
| AT1G78900.1 | Thale cress | cytosol | 80.0 | 15.41 |
| Bra035074.1-P | Field mustard | cytosol | 80.0 | 15.41 |
| PGSC0003DMT400074197 | Potato | cytosol | 79.17 | 15.25 |
| Solyc06g063330.2.1 | Tomato | cytosol, unclear | 79.17 | 15.25 |
| Solyc12g055800.1.1 | Tomato | plastid | 79.17 | 15.25 |
| VIT_09s0054g00890.t01 | Wine grape | extracellular | 78.33 | 15.09 |
| VIT_04s0008g02580.t01 | Wine grape | cytosol | 79.17 | 15.06 |
| KRH44667 | Soybean | nucleus | 77.5 | 14.93 |
| KRH46991 | Soybean | nucleus | 77.5 | 14.93 |
| CDX77882 | Canola | mitochondrion | 15.83 | 8.8 |
| Zm00001d015426_P001 | Maize | cytosol | 16.67 | 3.98 |
| Zm00001d020223_P001 | Maize | cytosol | 3.33 | 3.54 |
| Zm00001d006403_P001 | Maize | plastid | 12.5 | 3.01 |
| GRMZM5G808402_P01 | Maize | cytosol, mitochondrion, plastid | 12.5 | 3.01 |
| Zm00001d036961_P004 | Maize | plasma membrane, plastid | 10.83 | 2.67 |
| Zm00001d046336_P001 | Maize | cytosol | 10.83 | 2.61 |
| Zm00001d009488_P001 | Maize | plasma membrane | 10.83 | 2.35 |
| Zm00001d038929_P001 | Maize | mitochondrion | 10.83 | 2.35 |
| Zm00001d043834_P001 | Maize | mitochondrion | 10.83 | 2.28 |
| Zm00001d000277_P001 | Maize | plastid | 8.33 | 1.77 |
| Zm00001d050687_P001 | Maize | cytosol | 3.33 | 1.68 |
Protein Annotations
| EnsemblPlants:Zm00001d015427_P001 | EnsemblPlants:Zm00001d015427_T001 | EnsemblPlantsGene:Zm00001d015427 | Gene3D:1.10.1140.10 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046034 | InterPro:ATPase_F1/V1_b/a_C | InterPro:IPR024034 | InterPro:V-ATPase_asu |
| KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 | PANTHER:PTHR43607 | PANTHER:PTHR43607:SF3 | ProteinID:AQK68822.1 | SignalP:SignalP-noTM |
| UniParc:UPI0008456578 | UniProt:A0A1D6H1R6 | MapMan:35.1 | : | : | : |
Description
V-type proton ATPase catalytic subunit A
Coordinates
chr5:+:89584539..89586791
Molecular Weight (calculated)
13592.4 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.199
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALVSLCFL SVRSPVDALG SVMEKGTYDK FCPFYKSVWM MRNIIHFNTL ANQAVERAAG TDGQKITYGV IKHRLGDLFY RLVSQKFEDP AEGEEALVGK
101: FKKLYDDLTT GFRNLEDEAR
101: FKKLYDDLTT GFRNLEDEAR
1: MATFASYDKF SPSYKSVWMM RNIIHFYNLA NQAIDRAAGV DGSDGYLHSH QTSLGRSFLP LSVSEV
Arabidopsis Description
Vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-like protein [Source:UniProtKB/TrEMBL;Acc:F4I600]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.