Factsheet for Zm00001d043834_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33146	Sorghum	mitochondrion	96.13	98.74
Zm00001d038929_P001	Maize	mitochondrion	94.02	96.75
KXG22502	Sorghum	mitochondrion	93.32	96.02
Zm00001d009488_P001	Maize	plasma membrane	92.97	95.66
Os05t0553000-02	Rice	mitochondrion	91.92	94.75
TraesCS3B01G298000.1	Wheat	mitochondrion	91.74	94.74
TraesCS3A01G264700.1	Wheat	mitochondrion	91.56	94.56
HORVU3Hr1G063590.2	Barley	plasma membrane	91.21	94.19
TraesCS3D01G264800.2	Wheat	golgi	91.21	94.02
HORVU1Hr1G083840.2	Barley	mitochondrion	89.46	91.88
VIT_17s0000g02900.t01	Wine grape	mitochondrion	89.1	91.52
TraesCS1A01G379000.1	Wheat	mitochondrion	88.75	91.32
VIT_01s0011g04490.t01	Wine grape	mitochondrion	88.93	90.84
CDX69928	Canola	cytosol	71.18	90.2
CDY44784	Canola	cytosol	71.18	90.2
CDY21559	Canola	cytosol	71.18	90.2
GSMUA_Achr3P20950_001	Banana	mitochondrion	87.52	89.57
Solyc05g008460.2.1	Tomato	plastid	87.52	89.41
Solyc02g091130.2.1	Tomato	unclear	86.29	89.11
PGSC0003DMT400078610	Potato	mitochondrion	86.29	89.11
TraesCS1B01G400300.1	Wheat	cytosol	69.95	89.04
PGSC0003DMT400078507	Potato	cytosol	86.99	89.03
Solyc04g007550.2.1	Tomato	plastid	86.82	87.9
PGSC0003DMT400015365	Potato	mitochondrion	86.64	87.72
KRH35827	Soybean	nucleus	85.76	87.3
KRG90945	Soybean	mitochondrion	85.24	86.76
AT5G08680.1	Thale cress	mitochondrion	81.2	82.65
CDY44783	Canola	mitochondrion	80.32	82.64
Bra009363.1-P	Field mustard	mitochondrion	80.49	82.52
CDX69929	Canola	mitochondrion	80.32	82.49
CDX78351	Canola	mitochondrion	80.49	82.37
CDY40737	Canola	mitochondrion	80.32	82.34
CDY40736	Canola	cytosol	80.32	82.34
CDY21558	Canola	mitochondrion	79.96	82.28
AT5G08690.1	Thale cress	mitochondrion	80.32	82.19
CDX81119	Canola	mitochondrion	80.32	82.19
AT5G08670.1	Thale cress	mitochondrion	80.32	82.19
Bra028648.1-P	Field mustard	mitochondrion	80.14	82.16
CDX78350	Canola	mitochondrion	79.96	82.13
CDX81118	Canola	mitochondrion	79.96	81.98
Bra006013.1-P	Field mustard	mitochondrion	79.61	81.77
Bra009360.1-P	Field mustard	mitochondrion	79.44	81.74
Bra028649.1-P	Field mustard	mitochondrion	78.21	78.9
GSMUA_Achr2P07890_001	Banana	cytosol	10.02	78.08
GRMZM5G808402_P01	Maize	cytosol, mitochondrion, plastid	57.47	65.66
Zm00001d006403_P001	Maize	plastid	57.47	65.66
Bra006014.1-P	Field mustard	mitochondrion	80.32	61.92
Zm00001d050687_P001	Maize	cytosol	25.66	61.34
Zm00001d000277_P001	Maize	plastid	50.97	51.42
Zm00001d020223_P001	Maize	cytosol	9.84	49.56
Zm00001d015426_P001	Maize	cytosol	18.63	21.07
Zm00001d036961_P004	Maize	plasma membrane, plastid	17.4	20.33
Zm00001d053765_P003	Maize	cytosol	22.14	20.29
Zm00001d046336_P001	Maize	cytosol	17.4	19.88
Zm00001d015427_P001	Maize	extracellular, plastid	2.28	10.83

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	EntrezGene:103651342	MapMan:2.4.6.2.2	Gene3D:2.40.10.170
Gene3D:3.40.50.300	UniProt:A0A1D6NFC0	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N
InterPro:ATPase_F1/V1/A1_a/bsu_N_sf	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0000275
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0045261	GO:GO:0046034
GO:GO:0046933	GO:GO:0099132	GO:GO:1902600	InterPro:IPR024034	HAMAP:MF_01347	ProteinID:ONM39174.1
InterPro:P-loop_NTPase	PFAM:PF00006	PFAM:PF02874	PFAM:PF11421	PIRSF:PIRSF039072	ScanProsite:PS00152
PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540
TIGRFAMs:TIGR01039	UniParc:UPI0008436F5F	EnsemblPlantsGene:Zm00001d043834	EnsemblPlants:Zm00001d043834_P001	EnsemblPlants:Zm00001d043834_T001	SEG:seg

Description

ATP synthase subunit beta chloroplastic

Coordinates

chr3:-:211155659..211160136

Molecular Weight (calculated)

61199.5 Da

IEP (calculated)

6.306

GRAVY (calculated)

-0.058

Length

569 amino acids

Sequence
(BLAST)

001: MATRRAFSSI LRSASRIRSA SPSPCPRAPL HHRPSPAGFI LNRVAAYASS ATAQAAPAPP PPSTGKKTGG GKITDEFTGA GAIGQVCQVI GAVVDVRFDE
101: GLPPILTALE VLDNNIRLVL EVAQHLGENM VRTIAMDGTE GLVRGQRVLN TGSPITVPVG RATLGRIINV IGEPIDEKGD ITTNHFLPIH REAPAFVEQA
201: TEQQILVTGI KWLLCIVLTQ GFYFYQVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLDDKQ
301: SESKCALVYG QMNEPPGARA RVGLTGLTVA EHFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLATDLG GLQERITTTK KGSITSVQAI
401: YVPADDLTDP APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HVLGEDHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI
501: QRFLSQPFHV AEVFTGAPGK YVELKESVKS FQGVLDGKYD DLPEQSFYMV GGIEEVIAKA EKIAKESAS

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.