Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
15069638
extracellular: 18372294 nucleus: 19621931 cytosol: 19685898 plastid: 21433289 plasma membrane: 27800704 extracellular: 28232208 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
19685898
doi
Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.
msms PMID:
15069638
doi
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
msms PMID:
21433289
doi
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID:
18372294
doi
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os12t0207500-00 | Rice | extracellular, plastid | 81.19 | 98.55 |
HORVU0Hr1G030780.2 | Barley | mitochondrion | 32.62 | 91.95 |
Os06t0120732-00 | Rice | cytosol | 34.29 | 85.71 |
CAA34003 | Rice | extracellular | 99.76 | 84.14 |
Zm00001d050687_P001 | Maize | cytosol | 43.33 | 76.47 |
Os05t0553000-02 | Rice | mitochondrion | 70.95 | 53.99 |
Os01t0711000-01 | Rice | plastid | 21.67 | 18.65 |
Os06t0568200-01 | Rice | nucleus, plasma membrane, vacuole | 21.43 | 18.44 |
Os06t0662000-01 | Rice | nucleus, plasma membrane | 25.95 | 17.58 |
Os02t0175400-01 | Rice | plasma membrane | 25.71 | 17.39 |
Protein Annotations
KEGG:00190+3.6.3.14 | KEGG:00195+3.6.3.14 | MapMan:1.1.9.2.2 | Gene3D:1.10.1140.10 | Gene3D:3.40.50.300 | UniProt:A0A0P0XTT3 |
InterPro:AAA+_ATPase | InterPro:ATP_synth_F1_bsu | InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd | InterPro:ATPase_F1/V1_b/a_C | ProteinID:BAT10475.1 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006754 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 |
GO:GO:0045261 | GO:GO:0046933 | GO:GO:0099132 | InterPro:IPR024034 | HAMAP:MF_01347 | EnsemblPlantsGene:Os10g0355800 |
EnsemblPlants:Os10t0355800-00 | InterPro:P-loop_NTPase | PFAM:PF00006 | PANTHER:PTHR15184 | PANTHER:PTHR15184:SF43 | SMART:SM00382 |
SUPFAM:SSF47917 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01039 | UniParc:UPI0003938AB4 | : | : |
Description
Similar to ATP synthase CF1 beta subunit. (Os10t0355800-00)
Coordinates
chr10:-:10858911..10860173
Molecular Weight (calculated)
45466.8 Da
IEP (calculated)
4.844
GRAVY (calculated)
-0.059
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MSATDGLMRG MEVIDTGAPL SVPVGGATLG RIFNVLGEPV DNLGPVDTSA TFPIHRSAPA FIELDTKLSI FETGIKVVDL LAPYRRGGKI GLFGGAGVGK
101: TVLIMELINN IAKAHGGVSV FGGVGERTRE GNDLYMEMKE SGVINEKNLE ESKVALVYGQ MNEPPGARMR VGLTALTMAE YFRDVNKQDV LLFIDNIFRF
201: VQAGSEVSAL LGRMPSAVGY QPTLSTEMGS LQERITSTKK GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLSRGLAS KGIYPTVDPL DSTSTMLQPR
301: IVGNEHYETA QRVKQTLQRY KELQDIIAIL GLDELSEEDR LTVARARKIE RFLSQPFFVA EVFTGSPGKY VGLAETIRGF QLILSGELDG LPEQAFYLVG
401: NIDEASTKAI NLEEENKLKK
101: TVLIMELINN IAKAHGGVSV FGGVGERTRE GNDLYMEMKE SGVINEKNLE ESKVALVYGQ MNEPPGARMR VGLTALTMAE YFRDVNKQDV LLFIDNIFRF
201: VQAGSEVSAL LGRMPSAVGY QPTLSTEMGS LQERITSTKK GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLSRGLAS KGIYPTVDPL DSTSTMLQPR
301: IVGNEHYETA QRVKQTLQRY KELQDIIAIL GLDELSEEDR LTVARARKIE RFLSQPFFVA EVFTGSPGKY VGLAETIRGF QLILSGELDG LPEQAFYLVG
401: NIDEASTKAI NLEEENKLKK
001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK
Arabidopsis Description
ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.