Factsheet for Os12t0207500-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

cytosol 3
plastid 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 21433289
extracellular: 23159799

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0355800-00	Rice	cytosol, extracellular, plastid	98.55	81.19
Os06t0120732-00	Rice	cytosol	37.57	77.38
HORVU0Hr1G030780.2	Barley	mitochondrion	33.24	77.18
Zm00001d050687_P001	Maize	cytosol	50.0	72.69
CAA34003	Rice	extracellular	98.84	68.67
Os05t0553000-02	Rice	mitochondrion	74.28	46.56
Os01t0711000-01	Rice	plastid	23.41	16.6
Os06t0568200-01	Rice	nucleus, plasma membrane, vacuole	23.12	16.39
Os06t0662000-01	Rice	nucleus, plasma membrane	27.46	15.32
Os02t0175400-01	Rice	plasma membrane	27.17	15.14

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0P0Y832
InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	ProteinID:BAT16302.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020
GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	InterPro:IPR024034	EnsemblPlantsGene:Os12g0207500
EnsemblPlants:Os12t0207500-00	InterPro:P-loop_NTPase	PFAM:PF00006	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43
SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI000393A8E0	:

Description

Similar to ATP synthase subunit beta. (Os12t0207500-00)

Coordinates

chr12:-:5612066..5613106

Molecular Weight (calculated)

37203.9 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.014

Length

346 amino acids

Sequence
(BLAST)

001: MSATDGLMRG MEVIDTGAPL SVPVGGATLG RIFNVLGEPV DNLGPVDTSA TFPIHISAPA FIELDTKLSI FQTGIKVVDL LAPYRRGGKI GLFGGAGVGK
101: TVLIMELINN IAKAHGGVSV FGGVGERTRE GNDLYMEMKE SGVINEKNLE ESKVALVYGQ MNEPPGARMR VGLTALTMAE YFRDVNKQDV LLFIDNIFRF
201: VQAGSEVSSL LGRMPSAVGY QPTLSTEMGS LQERITSTKK GSITSIQAVY VHADDLTDPA PATTFAHLDA TTVLSRGLAS KGIYPAVDPL DSTSTMLQPR
301: IVGNEHYETA QRVKQTLQRY KELQDIIAIL GLDELSEEDR LTVARA

Best Arabidopsis Sequence Match ( AT5G08670.1 )
(BLAST)

001: MASRRVLSSL LRSSSGRSAA KLGNRNPRLP SPSPARPAAP CSYLLGRVAE YATSSPASSA APSSAPAKDE GKKTYDYGGK GAIGRVCQVI GAIVDVRFED
101: QEGLPPIMTS LEVQDHPTRL VLEVSHHLGQ NVVRTIAMDG TEGLVRGRKV LNTGAPITVP VGRATLGRIM NVLGEPIDER GEIKTEHYLP IHRDAPALVD
201: LATGQEILAT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL IMELINNVAK AHGGFSVFAG VGERTREGND LYREMIESGV IKLGEKQSES KCALVYGQMN
301: EPPGARARVG LTGLTVAEYF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP TLASDLGALQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA
401: TTFAHLDATT VLSRQISELG IYPAVDPLDS TSRMLSPHIL GEEHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKLT VARARKIQRF LSQPFHVAEI
501: FTGAPGKYVD LKENINSFQG LLDGKYDDLS EQSFYMVGGI DEVVAKAEKI AKESAA

Arabidopsis Description

ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.