Factsheet for VIT_14s0068g01700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21198	Canola	cytosol	80.31	44.16
VIT_00s0332g00060.t01	Wine grape	mitochondrion	69.29	38.6
HORVU0Hr1G031360.2	Barley	cytosol	85.04	33.64
TraesCS3B01G186000.1	Wheat	cytosol	83.46	25.36
Zm00001d000277_P001	Maize	plastid	83.46	18.79
VIT_17s0000g02900.t01	Wine grape	mitochondrion	59.06	13.54
VIT_01s0011g04490.t01	Wine grape	mitochondrion	59.06	13.46
VIT_03s0038g02760.t01	Wine grape	cytosol	19.68	5.12
VIT_09s0054g00890.t01	Wine grape	extracellular	24.41	4.98
VIT_18s0001g01020.t01	Wine grape	cytosol, extracellular	19.68	4.97
VIT_04s0008g02580.t01	Wine grape	cytosol	24.41	4.91
VIT_06s0009g03730.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_14s0068g01700	EMBL:FN595232	EnsemblPlants:VIT_14s0068g01700.t01	EnsemblPlantsGene:VIT_14s0068g01700	Gene3D:3.40.50.12240	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:P-loop_NTPase	KEGG:00190+3.6.3.14
KEGG:00195+3.6.3.14	PANTHER:PTHR15184	PANTHER:PTHR15184:SF43	PFAM:PF00006	ProteinID:CCB47007	ProteinID:CCB47007.1
SEG:seg	SUPFAM:SSF52540	UniParc:UPI0002108131	UniProt:F6H464	MapMan:35.1	:

Description

No Description!

Coordinates

chr14:-:25406145..25406772

Molecular Weight (calculated)

13538.7 Da

IEP (calculated)

8.502

GRAVY (calculated)

0.327

Length

127 amino acids

Sequence
(BLAST)

001: MSATDGLMRG MKVIDTGAPL SVPVGGATLG RIFNVLGEPV DNLGHVDTRT TSPIHRSAPA FIQLDTKLSI FETGIKVVDL LAPYRCGGKI GLFGGVGVGK
101: TVLIMELINN IAKDHENFFN IYKILIS

Best Arabidopsis Sequence Match ( ATCG00480.1 )
(BLAST)

001: MRTNPTTSNP EVSIREKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTLGQEIN VTCEVQQLLG NNRVRAVAMS ATEGLKRGMD VVDMGNPLSV
101: PVGGATLGRI FNVLGEPVDN LGPVDTRTTS PIHKSAPAFI ELDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV LIMELINNIA KAHGGVSVFG
201: GVGERTREGN DLYMEMKESG VINEQNLAES KVALVYGQMN EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP
301: TLSTEMGTLQ ERITSTKKGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG IYPAVDPLDS TSTMLQPRIV GEEHYETAQQ VKQTLQRYKE
401: LQDIIAILGL DELSEEDRLT VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFNL ILSGEFDSLP EQAFYLVGNI DEATAKATNL EMESKLKK

Arabidopsis Description

ATPBATP synthase subunit beta, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P19366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.