Factsheet for GSMUA_Achr3P29100_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P12870_001	Banana	cytosol	73.55	99.52
GSMUA_Achr9P21710_001	Banana	mitochondrion	95.06	97.12
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	9.35	92.98
CDY44784	Canola	cytosol	72.31	91.31
CDY21559	Canola	cytosol	72.31	91.31
CDX69928	Canola	cytosol	72.31	91.31
GSMUA_Achr3P20950_001	Banana	mitochondrion	88.36	90.11
Bra009363.1-P	Field mustard	mitochondrion	82.54	84.32
CDX69929	Canola	mitochondrion	82.36	84.3
CDY44783	Canola	mitochondrion	82.19	84.27
CDY21558	Canola	mitochondrion	82.19	84.27
CDX78350	Canola	mitochondrion	82.19	84.12
CDX78351	Canola	mitochondrion	82.36	83.99
CDX81118	Canola	mitochondrion	82.19	83.96
CDX81119	Canola	mitochondrion	82.19	83.81
CDY40736	Canola	cytosol	82.01	83.78
CDY40737	Canola	mitochondrion	82.01	83.78
Bra006013.1-P	Field mustard	mitochondrion	81.83	83.75
Bra009360.1-P	Field mustard	mitochondrion	81.66	83.73
Bra028648.1-P	Field mustard	mitochondrion	81.83	83.6
AT5G08690.1	Thale cress	mitochondrion	81.83	83.45
AT5G08670.1	Thale cress	mitochondrion	81.83	83.45
AT5G08680.1	Thale cress	mitochondrion	82.19	83.36
GSMUA_Achr2P07900_001	Banana	mitochondrion	26.1	83.15
GSMUA_AchrUn_...	Banana	mitochondrion	79.72	82.03
GSMUA_Achr2P07890_001	Banana	cytosol	10.41	80.82
Bra028649.1-P	Field mustard	mitochondrion	79.72	80.14
GSMUA_Achr1P20890_001	Banana	plastid	61.2	72.29
Bra006014.1-P	Field mustard	mitochondrion	82.19	63.14
GSMUA_AchrUn_...	Banana	cytosol	1.76	52.63
GSMUA_Achr1P01800_001	Banana	mitochondrion	6.35	41.86
GSMUA_Achr5P22160_001	Banana	cytosol	18.17	21.11
GSMUA_Achr2P16710_001	Banana	cytosol	17.81	20.7
GSMUA_Achr9P23040_001	Banana	cytosol	22.57	20.61
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	17.64	20.49
GSMUA_Achr1P10520_001	Banana	plasma membrane	22.05	20.13
GSMUA_Achr11P...	Banana	cytosol	22.05	20.13
GSMUA_Achr8P05550_001	Banana	cytosol	18.17	18.66

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.10.910	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:2.40.10.170
Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATP_synth_F1_beta_su	InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_N_sf
InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0000275	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	GO:GO:0045261
GO:GO:0046034	GO:GO:0046933	GO:GO:0099132	GO:GO:1902600	EnsemblPlantsGene:GSMUA_Achr3G29100_001	EnsemblPlants:GSMUA_Achr3P29100_001
EnsemblPlants:GSMUA_Achr3T29100_001	InterPro:IPR024034	UniProt:M0SIS6	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006
PFAM:PF02874	PFAM:PF11421	PIRSF:PIRSF039072	ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44
SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF50615	SUPFAM:SSF52540	TIGRFAMs:TIGR01039	UniParc:UPI0002967B0F
SEG:seg	:	:	:	:	:

Description

ATP synthase subunit beta, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G29100_001]

Coordinates

chr3:+:28391460..28395837

Molecular Weight (calculated)

60498.7 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.053

Length

567 amino acids

Sequence
(BLAST)

001: MASRRLLSSL LRSSARRSPA ARSPAAASSA PRAPMRPSPA GFVLSRAVEY ATSAAAPQST PPPSKAPAGP SGKITDEFTG AGAIGKVCQV IGAVVDVRFN
101: EGLPPILTAL EVLDNQIRLV LEVAQHLGEN MVRTIAMDGT EGLVRGQRVL NTGSPITVPV GRATLGRIMN VIGEPIDEKG DIKTNHFLPI HREAPAFVEQ
201: ATEQQILVTG IKALICFSSP FSCSVVDLLA PYQRGGKIGL FGGAGVGKTV LIMELINNVA KAHGGFSVFA GVGERTREGN DLYREMIESG VIKLGDKQGE
301: SKCALVYGQM NEPPGARARV GLTGLTVAEH FRDAEGQDVL LFIDNIFRFT QANSEVSALL GRIPSAVGYQ PTLATDLGGL QERITTTKKG SITSVQAIYV
401: PADDLTDPAP ATTFAHLDAT TVLSRQISEL GIYPAVDPLD STSRMLSPHV LGEEHYNTAR GVQKVLQNYK NLQDIIAILG MDELSEDDKL TVARARKIQR
501: FLSQPFHVAE VFTGAPGKYV ELKESVNSFQ GVLDGKYDDL PEQSFYMVGG IEEVIAKAEK IAKESAA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.