Factsheet for GSMUA_Achr8P05550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22160_001	Banana	cytosol	86.23	97.54
GSMUA_Achr2P16710_001	Banana	cytosol	86.05	97.34
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	85.69	96.93
TraesCS3D01G250900.1	Wheat	cytosol	85.51	96.72
TraesCS3A01G250500.1	Wheat	extracellular	85.33	96.52
Os01t0711000-01	Rice	plastid	85.33	96.52
KRG90658	Soybean	cytosol	85.33	96.52
KRH36093	Soybean	endoplasmic reticulum	85.14	96.31
KRH40221	Soybean	nucleus	85.14	96.11
KRH00994	Soybean	cytosol	85.14	96.11
OQU84653	Sorghum	cytosol	84.78	95.9
HORVU3Hr1G067040.5	Barley	cytosol, plastid	86.59	90.19
TraesCS3B01G280000.2	Wheat	cytosol	83.88	84.8
GSMUA_Achr1P12870_001	Banana	cytosol	16.85	22.2
GSMUA_Achr1P10520_001	Banana	plasma membrane	22.28	19.81
GSMUA_Achr9P23040_001	Banana	cytosol	22.28	19.81
GSMUA_Achr1P01800_001	Banana	mitochondrion	3.08	19.77
GSMUA_Achr11P...	Banana	cytosol	21.92	19.48
GSMUA_Achr9P21710_001	Banana	mitochondrion	18.48	18.38
GSMUA_Achr3P29100_001	Banana	mitochondrion	18.66	18.17
GSMUA_Achr3P20950_001	Banana	mitochondrion	18.12	17.99
GSMUA_AchrUn_...	Banana	mitochondrion	17.03	17.06
GSMUA_Achr1P20890_001	Banana	plastid	13.22	15.21
GSMUA_Achr2P07890_001	Banana	cytosol	1.99	15.07
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	1.45	14.04
GSMUA_Achr2P07900_001	Banana	mitochondrion	4.35	13.48
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	MapMan:24.1.1.2.2	Gene3D:3.40.50.12240	InterPro:ATPase_F1/V1/A1_a/bsu_N	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd
InterPro:ATPase_V1-cplx_bsu	InterPro:ATPase_a/bsu_AS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0033180	GO:GO:0046034	GO:GO:1902600
EnsemblPlantsGene:GSMUA_Achr8G05550_001	EnsemblPlants:GSMUA_Achr8P05550_001	EnsemblPlants:GSMUA_Achr8T05550_001	UniProt:M0TMV8	HAMAP:MF_00310	InterPro:P-loop_NTPase
PFAM:PF00006	PFAM:PF02874	PIRSF:PIRSF039114	ScanProsite:PS00152	PANTHER:PTHR43389	PANTHER:PTHR43389:SF6
SUPFAM:SSF52540	TIGRFAMs:TIGR01040	UniParc:UPI00029612EB	InterPro:V-ATPase_su_B/beta	SEG:seg	:

Description

V-type proton ATPase subunit B 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G05550_001]

Coordinates

chr8:+:3616120..3623770

Molecular Weight (calculated)

61251.7 Da

IEP (calculated)

5.126

GRAVY (calculated)

-0.188

Length

552 amino acids

Sequence
(BLAST)

001: MLLTAKPEKS KEKCHLEMAF SALACRGWVP PGTISLLSPK SRSLRALLAF LSLSVIASEG FPVKMVVAQN SIDMEEGSLE IGMEYRTVSG VAGPLVILDK
101: VKGPKYQEIV NIRLGDGTTR RGQVLEVDGE KAVVQVFEGT SGIDNKYTTV QFTGEVLKTP VSLDMLGRIF NGSGKPIDNG PPVLPEAYLD ISGSSINPSE
201: RTYPEEMIQT GISTIDVMNS IARGQKIPLF SAAGLPHNEI AAQICRQAGL VKRLEKSDNL LEDGEEDNFA IVFAAMGVNM ETAQFFKRDF EENGSMERVT
301: LFLNLANDPT IERIITPRIA LTTAEYLAYE CGKHVLVILT DMSSYADALR EVSAAREEVP GRRGYPGYMY TDLATIYERA GRIEGRKGSI TQIPILTMPN
401: DDITHPTPDL TGYITEGQIY IDRQLHNRQI YPPINVLPSL SRLMKSAIGE GMTRRDHADV SNQLYANYAI GKDVQAMKAV VGEEALSSED LLYLEFLDKF
501: ERKFVTQGAY DTRNIFQSLD LAWTMLRIFP RELLHRIPAK TLDQYYSRDA AH

Best Arabidopsis Sequence Match ( AT4G38510.5 )
(BLAST)

001: MERIKSKMGA AENNLEMEGT LEIGMEYRTV SGVAGPLVIL EKVKGPKYQE IVNIRLGDGT TRRGQVLEVD GEKAVVQVFE GTSGIDNKYT TVQFTGEVLK
101: TPVSLDMLGR IFNGSGKPID NGPPILPEAY LDISGSSINP SERTYPEEMI QTGISTIDVM NSIARGQKIP LFSAAGLPHN EIAAQICRQA GLVKRLEKSD
201: NLLEHQEDDN FAIVFAAMGV NMETAQFFKR DFEENGSMER VTLFLNLAND PTIERIITPR IALTTAEYLA YECGKHVLVI LTDMSSYADA LREVSAAREE
301: VPGRRGYPGY MYTDLATIYE RAGRIEGRKG SITQIPILTM PNDDITHPTP DLTGYITEGQ IYIDRQLHNR QIYPPINVLP SLSRLMKSAI GEGMTRRDHS
401: DVSNQLYANY AIGKDVQAMK AVVGEEALSS EDLLYLEFLD KFERKFVAQG AYDTRNIFQS LDLAWTLLRI FPRELLHRIP AKTLDQFYSR DTTN

Arabidopsis Description

ATPase, V1 complex, subunit B protein [Source:UniProtKB/TrEMBL;Acc:F4JTQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.