Factsheet for GSMUA_Achr1P12870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P20900_001	Banana	mitochondrion, peroxisome, plastid	12.65	92.98
CDY21559	Canola	cytosol	93.32	87.08
CDY44784	Canola	cytosol	93.32	87.08
CDX69928	Canola	cytosol	93.32	87.08
GSMUA_Achr2P07900_001	Banana	mitochondrion	34.13	80.34
GSMUA_Achr2P07890_001	Banana	cytosol	13.84	79.45
GSMUA_Achr9P21710_001	Banana	mitochondrion	99.52	75.14
GSMUA_Achr3P29100_001	Banana	mitochondrion	99.52	73.55
GSMUA_Achr3P20950_001	Banana	mitochondrion	96.9	73.02
CDY44783	Canola	mitochondrion	93.32	70.71
CDY21558	Canola	mitochondrion	93.32	70.71
CDX78350	Canola	mitochondrion	93.32	70.58
CDX69929	Canola	mitochondrion	93.32	70.58
CDX81118	Canola	mitochondrion	93.32	70.45
Bra028648.1-P	Field mustard	mitochondrion	93.32	70.45
Bra009363.1-P	Field mustard	mitochondrion	93.32	70.45
CDY40736	Canola	cytosol	93.32	70.45
CDY40737	Canola	mitochondrion	93.32	70.45
Bra009360.1-P	Field mustard	mitochondrion	92.84	70.34
CDX78351	Canola	mitochondrion	93.32	70.32
CDX81119	Canola	mitochondrion	93.32	70.32
AT5G08690.1	Thale cress	mitochondrion	93.32	70.32
AT5G08670.1	Thale cress	mitochondrion	93.32	70.32
Bra006013.1-P	Field mustard	mitochondrion	92.84	70.22
AT5G08680.1	Thale cress	mitochondrion	93.32	69.95
Bra028649.1-P	Field mustard	mitochondrion	90.45	67.2
GSMUA_AchrUn_...	Banana	mitochondrion	84.96	64.61
Bra006014.1-P	Field mustard	mitochondrion	93.08	52.85
GSMUA_AchrUn_...	Banana	cytosol	2.39	52.63
GSMUA_Achr1P20890_001	Banana	plastid	59.43	51.88
GSMUA_Achr1P01800_001	Banana	mitochondrion	8.59	41.86
GSMUA_Achr2P16710_001	Banana	cytosol	22.2	19.06
GSMUA_Achr5P22160_001	Banana	cytosol	22.2	19.06
GSMUA_Achr7P09090_001	Banana	cytosol, plasma membrane	21.96	18.85
GSMUA_Achr9P23040_001	Banana	cytosol	27.21	18.36
GSMUA_Achr1P10520_001	Banana	plasma membrane	26.73	18.04
GSMUA_Achr11P...	Banana	cytosol	26.73	18.04
GSMUA_Achr8P05550_001	Banana	cytosol	22.2	16.85

Protein Annotations

KEGG:00190+3.6.3.14	KEGG:00195+3.6.3.14	Gene3D:1.10.1140.10	MapMan:2.4.6.2.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATP_synth_F1_bsu	InterPro:ATPase_F1/V1/A1_a/bsu_nucl-bd	InterPro:ATPase_F1/V1_b/a_C	InterPro:ATPase_a/bsu_AS	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787
GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr1G12870_001	EnsemblPlants:GSMUA_Achr1P12870_001	EnsemblPlants:GSMUA_Achr1T12870_001
InterPro:IPR024034	UniProt:M0RZE5	HAMAP:MF_01347	InterPro:P-loop_NTPase	PFAM:PF00006	PIRSF:PIRSF039072
ScanProsite:PS00152	PANTHER:PTHR15184	PANTHER:PTHR15184:SF44	SMART:SM00382	SUPFAM:SSF47917	SUPFAM:SSF52540
TIGRFAMs:TIGR01039	UniParc:UPI000296FCB9	SEG:seg	:	:	:

Description

ATP synthase subunit beta, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G12870_001]

Coordinates

chr1:-:9889821..9896224

Molecular Weight (calculated)

45304.4 Da

IEP (calculated)

5.197

GRAVY (calculated)

-0.117

Length

419 amino acids

Sequence
(BLAST)

001: MDGTEGLVRG QRVLNTGSPI TVPVGRATLG RIMNVIGEPI DEKGEIKTNH FLPIHREAPA FVEQATEQQI LVTGIKVVDL LAPYQRGGKI GLFGGAGVGK
101: TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGDKQ IESKCALVYG QMNEPPGARA RVGLTGLTVA EHFRDAEGQD VLLFIDNIFR
201: FTQANSEVSA LLGRIPSAVG YQPTLATDLG GLQERITTTK KGSITSVQAI YVPADDLTDP APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP
301: HVLGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV AEVFTGAPGK YVELKESVNS FQGVLDGKYD DLPEQSFYMV
401: GGIEEVIAKA EKIAKESAA

Best Arabidopsis Sequence Match ( AT5G08680.1 )
(BLAST)

001: MASRRILSSL LRSSSSRSTS KSSLIGSRNP RLLSPGPAHG AAPCGTLLGR VAEYSTSSPA NSAAPSSAPA KDEGKKTYDY GGKGAIGRVC QVIGAIVDVR
101: FEDQEGLPPI MTSLEVQDHP TRLVLEVSHH LGQNVVRTIA MDGTEGLVRG RKVLNTGAPI TVPVGRATLG RIMNVLGEPI DERGEIKTEH YLPIHRDAPA
201: LVDLATGQEI LATGIKVVDL LAPYQRGGKI GLFGGAGVGK TVLIMELINN VAKAHGGFSV FAGVGERTRE GNDLYREMIE SGVIKLGEKQ SESKCALVYG
301: QMNEPPGARA RVGLTGLTVA EYFRDAEGQD VLLFIDNIFR FTQANSEVSA LLGRIPSAVG YQPTLASDLG ALQERITTTK KGSITSVQAI YVPADDLTDP
401: APATTFAHLD ATTVLSRQIS ELGIYPAVDP LDSTSRMLSP HILGEEHYNT ARGVQKVLQN YKNLQDIIAI LGMDELSEDD KLTVARARKI QRFLSQPFHV
501: AEIFTGAPGK YVDLKENINS FQGLLDGKYD DLSEQSFYMV GGIDEVVAKA EKIAKESAA

Arabidopsis Description

ATP synthase subunit beta-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C5A9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.