Factsheet for Bra001021.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g00720.t01	Wine grape	cytosol	2.24	2.93
TraesCS3D01G491800.1	Wheat	mitochondrion	0.84	1.91
Os03t0289100-02	Rice	plasma membrane	1.12	1.46
TraesCS3D01G491900.2	Wheat	plasma membrane	1.12	1.36
HORVU3Hr1G107970.1	Barley	cytosol	0.84	1.09
HORVU3Hr1G107990.1	Barley	cytosol	0.84	1.09
Bra039146.1-P	Field mustard	cytosol	0.7	0.99
Bra032622.1-P	Field mustard	cytosol	0.56	0.9
Zm00001d028733_P003	Maize	cytosol	0.56	0.79
Bra021482.1-P	Field mustard	cytosol	0.7	0.78
KRH44935	Soybean	cytosol	0.28	0.72
TraesCS3D01G492100.1	Wheat	cytosol	0.28	0.66
TraesCS3B01G545400.1	Wheat	cytosol	0.28	0.66
Bra033088.1-P	Field mustard	cytosol	0.42	0.61
Bra001022.1-P	Field mustard	cytosol	0.42	0.6
Bra025379.1-P	Field mustard	cytosol	0.42	0.59
KXG39612	Sorghum	cytosol	0.42	0.58
TraesCS3B01G545300.2	Wheat	cytosol	0.28	0.46
TraesCS3B01G544400.2	Wheat	cytosol	0.28	0.45
Bra010783.1-P	Field mustard	plastid	0.28	0.44
Bra032374.1-P	Field mustard	plastid	0.28	0.43
Bra028245.1-P	Field mustard	cytosol	0.28	0.4
TraesCS3B01G544700.1	Wheat	cytosol	0.28	0.39
HORVU4Hr1G056610.3	Barley	cytosol	0.28	0.39
TraesCS4A01G108700.1	Wheat	cytosol	0.14	0.29
Bra006809.1-P	Field mustard	cytosol	0.14	0.26
Bra002712.1-P	Field mustard	cytosol	0.14	0.25
Bra034315.1-P	Field mustard	cytosol, mitochondrion	0.14	0.23
Bra001665.1-P	Field mustard	cytosol	0.14	0.23
Bra022219.1-P	Field mustard	cytosol	0.14	0.22
Bra032246.1-P	Field mustard	cytosol	0.14	0.22
Bra025613.1-P	Field mustard	cytosol	0.14	0.22
Bra014875.1-P	Field mustard	plastid	0.14	0.21
Os08t0484600-01	Rice	cytosol	0.14	0.2
TraesCS4A01G108800.1	Wheat	cytosol	0.14	0.2
TraesCS4D01G196100.1	Wheat	cytosol	0.14	0.2
TraesCS4B01G195900.1	Wheat	cytosol	0.14	0.19
TraesCS3B01G544300.1	Wheat	endoplasmic reticulum, vacuole	0.0	0.0
Bra020156.1-P	Field mustard	cytosol	0.0	0.0
Bra002369.1-P	Field mustard	cytosol	0.0	0.0
HORVU3Hr1G108000.3	Barley	cytosol	0.0	0.0
Bra013799.1-P	Field mustard	cytosol	0.0	0.0
Bra014124.1-P	Field mustard	cytosol	0.0	0.0
Bra033282.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra001021.1	EnsemblPlants:Bra001021.1-P	EnsemblPlantsGene:Bra001021	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Csc1_N	InterPro:PHM7_cyt	InterPro:RSN1_7TM	ncoils:Coil	PANTHER:PTHR13018	PANTHER:PTHR13018:SF32
PFAM:PF02714	PFAM:PF13967	PFAM:PF14703	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540853
UniProt:M4C9Z2	MapMan:24.3.7	:	:	:	:

Description

AT3G01100 (E=0.0) HYP1, ATHYP1 | HYP1 (HYPOTHETICAL PROTEIN 1)

Coordinates

chrA03:+:14411079..14414204

Molecular Weight (calculated)

80739.8 Da

IEP (calculated)

8.918

GRAVY (calculated)

0.322

Length

713 amino acids

Sequence
(BLAST)

001: MILSALLTSV GINLGLCFLF FTLYSILRKQ PGNVTVYGPR LIQDGESQQT NAFNLERLLP TAGWVRRALE PTNEDILSNL GLDALVFIRV LVFSIRVFSF
101: ASVVGIFILL PVNYMGTEFE EFFDLPKKSL DSFSISNVND GSNKLWIHFS AIYIFTAVVC YLLYYEHKYL SSKRIDHFYS SKPQPHEFTV LVSGVPVVSG
201: NSISETVESF FREYHSSTYL SHVVVQRTDK LKALMNDAEK LYKKLTRVKS GSISRQKSMR DGFLGMFGKK VDVVDHYEKK LEKLEDDMRL KQSLLAGEEV
301: PAAFVSFRSR HGAAIATNIQ QGIDPTQWLT EPAPEPQDVH WPFFTASFVR RWISNVVVFV AFVALIILYV IPVVLVQGLA NLHQLETWFP FLKSILNIKV
401: VSQVITGYLP SLIYQLFLMI VPPIMLLLSS MQGYISHSQI EKSACIKLLV FTVWNSFFAN VLSGSALYRV NVFLEPKNIP RVLAAAVPAQ ASFFISYVVT
501: SGWTGLSSEI FRLVPLLWNF VMKLFGKEDD KEFEVPPTPF CQEIPSILFF GLLGTTYFFL SPLILPFLLV YFCLGYVIYR NQLLNVYAAK YETGGKFWPI
601: VHNSTIFSLV LMHVIAIGIF GLKELPLASS LTIPLPILTV LFSIYCQRRF LANFKSYPTE CLVNKDKADA REQNMSEFYA KLVVAYRDPA VSASRYARGI
701: SLEDPPLLRS NQG

Best Arabidopsis Sequence Match ( AT3G01100.1 )
(BLAST)

001: MLLSALLTSV GINLGLCFLF FTLYSILRKQ PSNVTVYGPR LVKKDGKSQQ SNEFNLERLL PTAGWVKRAL EPTNDEILSN LGLDALVFIR VFVFSIRVFS
101: FASVVGIFIL LPVNYMGTEF EEFFDLPKKS MDNFSISNVN DGSNKLWIHF CAIYIFTAVV CSLLYYEHKY ILTKRIAHLY SSKPQPQEFT VLVSGVPLVS
201: GNSISETVEN FFREYHSSSY LSHIVVHRTD KLKVLMNDAE KLYKKLTRVK SGSISRQKSR WGGFLGMFGN NVDVVDHYQK KLDKLEDDMR LKQSLLAGEE
301: VPAAFVSFRT RHGAAIATNI QQGIDPTQWL TEAAPEPEDV HWPFFTASFV RRWISNVVVL VAFVALLILY IVPVVLVQGL ANLHQLETWF PFLKGILNMK
401: IVSQVITGYL PSLIFQLFLL IVPPIMLLLS SMQGFISHSQ IEKSACIKLL IFTVWNSFFA NVLSGSALYR VNVFLEPKTI PRVLAAAVPA QASFFVSYVV
501: TSGWTGLSSE ILRLVPLLWS FITKLFGKED DKEFEVPSTP FCQEIPRILF FGLLGITYFF LSPLILPFLL VYYCLGYIIY RNQLLNVYAA KYETGGKFWP
601: IVHSYTIFSL VLMHIIAVGL FGLKELPVAS SLTIPLPVLT VLFSIYCQRR FLPNFKSYPT QCLVNKDKAD EREQNMSEFY SELVVAYRDP ALSASQDSRD
701: ISP

Arabidopsis Description

HYP1hypothetical protein 1 [Source:TAIR;Acc:AT3G01100]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.