Factsheet for Bra028245.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74460	Canola	cytosol	100.0	100.0
AT5G39440.1	Thale cress	cytosol	70.24	70.24
KRH44935	Soybean	cytosol	37.25	66.67
TraesCS3D01G492100.1	Wheat	cytosol	40.08	65.56
TraesCS3B01G545400.1	Wheat	cytosol	39.88	65.23
TraesCS4A01G108700.1	Wheat	cytosol	45.95	64.86
Bra025379.1-P	Field mustard	cytosol	66.19	63.87
Bra033088.1-P	Field mustard	cytosol	61.54	61.91
Bra039146.1-P	Field mustard	cytosol	62.75	61.26
Bra001022.1-P	Field mustard	cytosol	60.73	59.88
Os08t0484600-01	Rice	cytosol	60.53	58.74
Zm00001d028733_P003	Maize	cytosol	60.32	58.55
TraesCS3B01G545300.2	Wheat	cytosol	51.82	58.31
KXG39612	Sorghum	cytosol	60.53	58.28
TraesCS4D01G196100.1	Wheat	cytosol	59.92	58.15
TraesCS4A01G108800.1	Wheat	cytosol	59.92	58.15
TraesCS4B01G195900.1	Wheat	cytosol	59.92	57.7
HORVU4Hr1G056610.3	Barley	cytosol	59.72	57.39
TraesCS3B01G544400.2	Wheat	cytosol	49.6	55.43
TraesCS3B01G544300.1	Wheat	endoplasmic reticulum, vacuole	52.23	55.36
TraesCS3B01G544700.1	Wheat	cytosol	57.29	55.27
Os03t0289100-02	Rice	plasma membrane	60.73	54.74
HORVU3Hr1G107970.1	Barley	cytosol	57.49	51.82
HORVU3Hr1G107990.1	Barley	cytosol	57.29	51.27
HORVU3Hr1G108000.3	Barley	cytosol	35.83	51.16
TraesCS3D01G491900.2	Wheat	plasma membrane	57.09	47.96
Bra021482.1-P	Field mustard	cytosol	57.09	44.2
VIT_08s0040g00720.t01	Wine grape	cytosol	48.79	44.06
TraesCS3D01G491800.1	Wheat	mitochondrion	25.1	39.49
Bra002369.1-P	Field mustard	cytosol	30.97	34.69
Bra034315.1-P	Field mustard	cytosol, mitochondrion	30.57	34.32
Bra006809.1-P	Field mustard	cytosol	26.72	34.2
Bra002712.1-P	Field mustard	cytosol	27.94	34.16
Bra032622.1-P	Field mustard	cytosol	30.77	34.16
Bra020156.1-P	Field mustard	cytosol	29.96	33.56
Bra014124.1-P	Field mustard	cytosol	28.34	33.49
Bra001665.1-P	Field mustard	cytosol	29.55	32.96
Bra032374.1-P	Field mustard	plastid	30.97	32.76
Bra022219.1-P	Field mustard	cytosol	29.15	32.29
Bra014875.1-P	Field mustard	plastid	30.57	31.52
Bra025613.1-P	Field mustard	cytosol	28.74	31.35
Bra013799.1-P	Field mustard	cytosol	25.71	30.46
Bra010783.1-P	Field mustard	plastid	27.94	30.33
Bra033282.1-P	Field mustard	cytosol	29.55	30.29
Bra032246.1-P	Field mustard	cytosol	25.1	27.8
Bra001021.1-P	Field mustard	plasma membrane	0.4	0.28

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.1.1	MapMan:27.3.1.1	Gene3D:3.30.310.80	EnsemblPlantsGene:Bra028245	EnsemblPlants:Bra028245.1	EnsemblPlants:Bra028245.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001772
InterPro:IPR015940	InterPro:KA1/Ssp2_C	InterPro:KA1_dom	InterPro:Kinase-like_dom_sf	UniProt:M4EHI0	PFAM:PF00069
PFAM:PF02149	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50030	PFscan:PS50032
PANTHER:PTHR24343	PANTHER:PTHR24343:SF156	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF103243
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	InterPro:UBA	UniParc:UPI000254496B	SEG:seg	:

Description

AT5G39440 (E=5e-196) SnRK1.3 | SnRK1.3 (SNF1-RELATED PROTEIN KINASE 1.3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA04:+:7075079..7078247

Molecular Weight (calculated)

56084.4 Da

IEP (calculated)

8.932

GRAVY (calculated)

-0.185

Length

494 amino acids

Sequence
(BLAST)

001: MNGSSSQISS KRKSVLPTYK IGKTLGQGSF AKVKLAVHKT TGHNVAIKIL NREKIKQMGI EAKVEREIKI IRLLMHPHII RQYEVIETPE DIYVVMEYVK
101: AGELFDYIVE KGKLHEDEAR YLFQQIISGV EYCHRNMIAH RDLKPENILM DTKFNIKIAD FGLSNVMHDG HFLKTSCGSP NYAAPEVISG KLYAGPEVDI
201: WSCGVILYAL LCGNLPFDDE NMPGLFSKIK KGEYILPDHL SYAARDLIPR ILTVDPMMRI SIPGIRQHPW FSSKLPPYLA APPLDTTEQA REINEEIIRD
301: VVNLGFVEKH VKESLLNRIQ NEATVAYYLL LDSRRRSPSD YFESNVNRIS SFNSTIPAQT VAPFPALVNH HLMAGLRPRV SADKKWTLGL QSQARPKDIM
401: TAVFKALQDL KVSWKQIGEY NIKCRWVHQS SISKEKSNMM EAELAMISPT VLKFELQLYK AGEGKYVLDI QIADGPQFLF LDLSVSLLRE LNVV

Best Arabidopsis Sequence Match ( AT5G39440.1 )
(BLAST)

001: MDGSSEKTTN KLVSILPNYR IGKTLGHGSF AKVKLALHVA TGHKVAIKIL NRSKIKNMGI EIKVQREIKI LRFLMHPHII RQYEVIETPN DIYVVMEYVK
101: SGELFDYIVE KGKLQEDEAR HLFQQIISGV EYCHRNMIVH RDLKPENVLL DSQCNIKIVD FGLSNVMHDG HFLKTSCGSP NYAAPEVISG KPYGPDVDIW
201: SCGVILYALL CGTLPFDDEN IPNVFEKIKR GMYTLPNHLS HFARDLIPRM LMVDPTMRIS ITEIRQHPWF NNHLPLYLSI PPLDTIDQAK KIEEEIIQNV
301: VNIGFDRNHV VDSLANRIQN EATVAYHLIL DNRNQNSVPN DPFQSKFKEI SDGIFNSTLP VQNITSHVGH SFSALYGLKS NVKDDKTWTL GLQSQGSPYD
401: IMTEIFKALQ NLKICWKKIG LYNIKCRWVR SFAYYKNHTI EDECAIILPT VIKFEIQLYK VREGKYLLDI LRIDGPQFIF FDLCVAFLRE LGVL

Arabidopsis Description

SnRK1.3Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FLZ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.