Factsheet for Bra032246.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra017504.1-P
Bra022104.1-P
Bra028949.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48260.1	Bra017504.1-P	AT5G47100.1	14730064
AT1G48260.1	Bra022104.1-P	AT5G47100.1	14730064
AT1G48260.1	Bra028949.1-P	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23677	Canola	cytosol	87.67	98.0
Bra014124.1-P	Field mustard	cytosol	71.3	76.08
AT1G48260.1	Thale cress	cytosol	71.08	73.38
Bra001665.1-P	Field mustard	cytosol	66.59	67.04
Bra022219.1-P	Field mustard	cytosol	66.14	66.14
VIT_05s0020g00830.t01	Wine grape	cytosol	52.24	59.59
KRH12685	Soybean	cytosol	57.62	58.81
KRH37641	Soybean	cytosol	58.97	58.71
GSMUA_Achr3P13480_001	Banana	cytosol	54.26	58.17
KRH19498	Soybean	cytosol	56.95	56.95
KRH02470	Soybean	cytosol	56.95	56.7
GSMUA_Achr8P10920_001	Banana	cytosol	53.59	55.2
PGSC0003DMT400069822	Potato	cytosol	56.05	54.82
Solyc12g098910.1.1	Tomato	cytosol	57.4	54.82
Solyc05g053210.2.1	Tomato	cytosol	56.05	54.35
GSMUA_Achr11P...	Banana	cytosol	52.24	54.31
GSMUA_Achr11P...	Banana	cytosol	54.71	54.1
GSMUA_Achr1P25010_001	Banana	cytosol	53.14	51.97
Os07t0637000-01	Rice	cytosol	51.35	51.58
GSMUA_AchrUn_...	Banana	cytosol	54.26	50.84
Zm00001d040567_P001	Maize	cytosol	50.9	49.35
EES00612	Sorghum	cytosol	51.12	49.24
EER97615	Sorghum	cytosol	48.88	49.1
TraesCS2D01G155700.1	Wheat	cytosol	49.55	49.0
HORVU2Hr1G027080.5	Barley	cytosol	49.55	49.0
TraesCS2A01G150600.2	Wheat	cytosol	49.33	48.78
TraesCS2B01G175800.2	Wheat	cytosol	49.1	48.56
Os05t0136200-01	Rice	cytosol	49.33	48.46
Os01t0292200-01	Rice	cytosol	50.0	48.37
PGSC0003DMT400011724	Potato	cytosol	57.4	48.21
OQU77359	Sorghum	cytosol, mitochondrion	49.33	47.72
TraesCS1D01G082600.1	Wheat	cytosol	49.33	47.21
TraesCS1B01G098700.2	Wheat	cytosol	49.1	47.0
TraesCS1B01G098600.1	Wheat	cytosol	48.88	46.78
Zm00001d022272_P002	Maize	cytosol	49.78	46.54
TraesCS1D01G082200.1	Wheat	cytosol	48.43	46.45
TraesCS1A01G080500.2	Wheat	cytosol	48.43	46.25
Zm00001d006944_P001	Maize	cytosol	49.55	46.23
TraesCS1A01G080600.1	Wheat	cytosol	48.21	46.14
Zm00001d024762_P001	Maize	cytosol	47.76	46.0
TraesCS1A01G080700.1	Wheat	cytosol	48.43	45.86
TraesCS1D01G082500.1	Wheat	cytosol	48.65	45.21
HORVU1Hr1G017240.4	Barley	cytosol	48.88	44.31
HORVU1Hr1G017380.4	Barley	cytosol	48.88	44.04
Bra034315.1-P	Field mustard	cytosol, mitochondrion	41.7	42.27
Bra032622.1-P	Field mustard	cytosol	41.93	42.02
Bra002712.1-P	Field mustard	cytosol	37.89	41.83
Bra032374.1-P	Field mustard	plastid	43.5	41.54
Bra002369.1-P	Field mustard	cytosol	40.36	40.82
Bra006809.1-P	Field mustard	cytosol	35.2	40.67
Bra020156.1-P	Field mustard	cytosol	39.91	40.36
Bra014875.1-P	Field mustard	plastid	43.05	40.08
Bra013799.1-P	Field mustard	cytosol	37.44	40.05
Bra025613.1-P	Field mustard	cytosol	39.91	39.29
Bra010783.1-P	Field mustard	plastid	39.69	38.9
Bra033282.1-P	Field mustard	cytosol	40.81	37.76
Bra001022.1-P	Field mustard	cytosol	28.7	25.55
Bra028245.1-P	Field mustard	cytosol	27.8	25.1
Bra039146.1-P	Field mustard	cytosol	28.48	25.1
Bra025379.1-P	Field mustard	cytosol	27.58	24.02
Bra033088.1-P	Field mustard	cytosol	26.01	23.63
Bra021482.1-P	Field mustard	cytosol	28.7	20.06
Bra001021.1-P	Field mustard	plasma membrane	0.22	0.14

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	EnsemblPlantsGene:Bra032246	EnsemblPlants:Bra032246.1	EnsemblPlants:Bra032246.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR018451	InterPro:Kinase-like_dom_sf	UniProt:M4ETW4	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR24343	PANTHER:PTHR24343:SF143	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002547D7D	:	:	:	:

Description

AT1G48260 (E=7e-101) CIPK17, SnRK3.21 | CIPK17 (CBL-INTERACTING PROTEIN KINASE 17); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA05:+:12407438..12411851

Molecular Weight (calculated)

50456.7 Da

IEP (calculated)

8.726

GRAVY (calculated)

-0.112

Length

446 amino acids

Sequence
(BLAST)

001: MVTKEMRVGK YELGKTLGEG NSANVKLARD TVSGQSFAVK IIDKSRISRL NVSLQIKREI RTLKVLKHPN VVRLHEVLAS KTNIYMVLEY VTGGDLFDRI
101: VCEGKISERE GRKMFQQLID GLNYCHYKGV FHRDLKLENV LLDAKGHIKI TDFGRLPHVA PEVLVNKGYD GAASDIWSCG VILYAILTGC LPFDDTNLAA
201: ICRKIVKGDP PIPRWISPGA KTMIKRMLDP NPMTRITIAG IKANDWFKHD YSTPSNCHDE DDAISIQDVY EEEKTSDSPT VINAFQLIGM SLFLDLSGLF
301: ETENVSERQI RFTTNKPVVD VLDKIKTVLM EMGFCVQKKH TMLKAIQEES TRKGQGGLSV TAEVFEIIPL LNVVELRKSH GDSSLYNQVL INSCNYYLVS
401: LYIFSSNIDL KQTYRFWVGA VVREIIKRIG HMMCHTILLQ VQQLLR

Best Arabidopsis Sequence Match ( AT1G48260.1 )
(BLAST)

001: MVIKGMRVGK YELGRTLGEG NSAKVKFAID TLTGESFAIK IIEKSCITRL NVSFQIKREI RTLKVLKHPN IVRLHEVLAS KTKIYMVLEC VTGGDLFDRI
101: VSKGKLSETQ GRKMFQQLID GVSYCHNKGV FHRDLKLENV LLDAKGHIKI TDFGLSALSQ HYREDGLLHT TCGSPNYVAP EVLANEGYDG AASDIWSCGV
201: ILYVILTGCL PFDDANLAVI CRKIFKGDPP IPRWISLGAK TMIKRMLDPN PVTRVTIAGI KAHDWFKHDY TPSNYDDDDD VYLIQEDVFM MKEYEEEKSP
301: DSPTIINAFQ LIGMSSFLDL SGFFETEKLS ERQIRFTSNS LAKDLLENIE TIFTEMGFCL QKKHAKLKAI KEESTQKRQC GLSVTAEVFE ISPSLNVVEL
401: RKSHGDSSLY KQLYERLLNE LGSSSQVQEL LA

Arabidopsis Description

CIPK17CBL-interacting serine/threonine-protein kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q94C40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.