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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001665.1-P
Bra002654.1-P
Bra002712.1-P
Bra005446.1-P
Bra005447.1-P
Bra006809.1-P
Bra009293.1-P
Bra009294.1-P
Bra010263.1-P
Bra010725.1-P
Bra010783.1-P
Bra010841.1-P
Bra011236.1-P
Bra013340.1-P
Bra018319.1-P
Bra020371.1-P
Bra020996.1-P
Bra021628.1-P
Bra021897.1-P
Bra022219.1-P
Bra022794.1-P
Bra023777.1-P
Bra024032.1-P
Bra025613.1-P
Bra027311.1-P
Bra028709.1-P
Bra028912.1-P
Bra032042.1-P
Bra032374.1-P
Bra033893.1-P
Bra036868.1-P
Bra036870.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G55990.1 Bra010841.1-P AT1G29230.1 14730130
AT5G55990.1 Bra010783.1-P AT1G30270.1 16814720
AT5G55990.1 Bra032374.1-P AT1G30270.1 16814720
AT5G55990.1 Bra010783.1-P AT1G30270.1 17898163
AT5G55990.1 Bra032374.1-P AT1G30270.1 17898163
AT5G55990.1 Bra032042.1-P AT2G25090.1 17898163
AT5G55990.1 Bra018319.1-P AT2G30360.1 11230129
AT5G55990.1 Bra021628.1-P AT2G30360.1 11230129
AT5G55990.1 Bra022794.1-P AT2G30360.1 11230129
AT5G55990.1 Bra027311.1-P AT2G30360.1 11230129
AT5G55990.1 Bra018319.1-P AT2G30360.1 11402167
AT5G55990.1 Bra021628.1-P AT2G30360.1 11402167
AT5G55990.1 Bra022794.1-P AT2G30360.1 11402167
AT5G55990.1 Bra027311.1-P AT2G30360.1 11402167
AT5G55990.1 Bra018319.1-P AT2G30360.1 17483306
AT5G55990.1 Bra021628.1-P AT2G30360.1 17483306
AT5G55990.1 Bra022794.1-P AT2G30360.1 17483306
AT5G55990.1 Bra027311.1-P AT2G30360.1 17483306
AT5G55990.1 Bra018319.1-P AT2G30360.1 21798944
AT5G55990.1 Bra021628.1-P AT2G30360.1 21798944
AT5G55990.1 Bra022794.1-P AT2G30360.1 21798944
AT5G55990.1 Bra027311.1-P AT2G30360.1 21798944
AT5G55990.1 Bra005446.1-P AT2G34180.1 11230129
AT5G55990.1 Bra005447.1-P AT2G34180.1 11230129
AT5G55990.1 Bra021897.1-P AT2G34180.1 11230129
AT5G55990.1 Bra005446.1-P AT2G34180.1 14730130
AT5G55990.1 Bra005447.1-P AT2G34180.1 14730130
AT5G55990.1 Bra021897.1-P AT2G34180.1 14730130
AT5G55990.1 Bra001665.1-P AT3G17510.1 10590166
AT5G55990.1 Bra022219.1-P AT3G17510.1 10590166
AT5G55990.1 Bra001665.1-P AT3G17510.1 11230129
AT5G55990.1 Bra022219.1-P AT3G17510.1 11230129
AT5G55990.1 Bra023777.1-P AT3G23000.1 11230129
AT5G55990.1 Bra033893.1-P AT3G23000.1 11230129
AT5G55990.1 Bra023777.1-P AT3G23000.1 14730130
AT5G55990.1 Bra033893.1-P AT3G23000.1 14730130
AT5G55990.1 Bra036868.1-P AT4G14580.1 11230129
AT5G55990.1 Bra036870.1-P AT4G14580.1 11230129
AT5G55990.1 Bra013340.1-P AT4G18700.1 11230129
AT5G55990.1 Bra020996.1-P AT4G18700.1 11230129
AT5G55990.1 Bra013340.1-P AT4G18700.1 14730130
AT5G55990.1 Bra020996.1-P AT4G18700.1 14730130
AT5G55990.1 Bra010263.1-P AT4G30960.1 11230129
AT5G55990.1 Bra011236.1-P AT4G30960.1 11230129
AT5G55990.1 Bra024032.1-P AT4G30960.1 11230129
AT5G55990.1 Bra010263.1-P AT4G30960.1 17898163
AT5G55990.1 Bra011236.1-P AT4G30960.1 17898163
AT5G55990.1 Bra024032.1-P AT4G30960.1 17898163
AT5G55990.1 Bra010725.1-P AT4G38800.1 21798944
AT5G55990.1 Bra028912.1-P AT5G01820.1 11230129
AT5G55990.1 Bra028912.1-P AT5G01820.1 11577192
AT5G55990.1 Bra028912.1-P AT5G01820.1 14730130
AT5G55990.1 Bra028912.1-P AT5G01820.1 21798944
AT5G55990.1 Bra009293.1-P AT5G07070.1 11230129
AT5G55990.1 Bra009294.1-P AT5G07070.1 11230129
AT5G55990.1 Bra028709.1-P AT5G07070.1 11230129
AT5G55990.1 Bra025613.1-P AT5G35410.1 11402167
AT5G55990.1 Bra002712.1-P AT5G57630.1 21798944
AT5G55990.1 Bra006809.1-P AT5G57630.1 21798944
AT5G55990.1 Bra002654.1-P AT5G58380.1 21798944
AT5G55990.1 Bra020371.1-P AT5G58380.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36774 Canola cytosol 98.18 90.76
CDY11963 Canola cytosol 98.18 90.76
AT5G55990.1 Thale cress cytosol, extracellular 92.27 89.82
Bra035598.1-P Field mustard cytosol 91.82 89.38
Bra026421.1-P Field mustard cytosol 82.73 83.49
Solyc07g065820.2.1 Tomato cytosol 82.73 83.11
PGSC0003DMT400057342 Potato cytosol, extracellular 82.27 82.65
KRH46425 Soybean endoplasmic reticulum 84.55 82.3
KRG98442 Soybean cytosol 84.09 81.86
Os03t0626800-01 Rice cytosol 83.64 81.78
GSMUA_Achr9P12840_001 Banana cytosol 83.64 81.42
Solyc12g015870.1.1 Tomato cytosol 82.27 80.8
PGSC0003DMT400076653 Potato cytosol 82.27 80.8
Zm00001d033295_P001 Maize cytosol 82.27 80.44
Zm00001d041392_P001 Maize cytosol, extracellular 62.27 80.12
TraesCS4D01G068700.1 Wheat cytosol 81.36 79.56
TraesCS4A01G245500.1 Wheat cytosol 80.91 79.11
PGSC0003DMT400037245 Potato cytosol 79.09 78.38
TraesCS5D01G072100.1 Wheat cytosol 80.0 78.22
TraesCS5B01G071500.1 Wheat cytosol 80.0 78.22
TraesCS5A01G060600.1 Wheat cytosol 80.0 78.22
HORVU5Hr1G016320.1 Barley cytosol 80.0 78.22
HORVU4Hr1G011670.1 Barley vacuole 80.0 78.22
OQU79501 Sorghum cytosol 79.55 77.78
Os12t0597000-01 Rice plasma membrane, vacuole 79.55 77.78
Zm00001d030955_P003 Maize cytosol 79.09 77.33
TraesCS4B01G069900.1 Wheat cytosol 81.36 68.85
Bra012655.1-P Field mustard cytosol 53.64 55.4
Bra026422.1-P Field mustard cytosol, plastid 61.82 54.4
Bra011404.1-P Field mustard cytosol, plastid 51.82 54.03
Bra022104.1-P Field mustard cytosol 52.27 53.99
Bra040169.1-P Field mustard cytosol 52.27 53.99
Bra017504.1-P Field mustard cytosol 51.82 53.52
Bra009743.1-P Field mustard cytosol 51.36 51.13
Bra026462.1-P Field mustard cytosol 50.91 50.68
Bra029396.1-P Field mustard cytosol 49.09 48.87
Bra002301.1-P Field mustard cytosol 24.09 48.18
Bra027703.1-P Field mustard mitochondrion 45.91 47.2
Bra034543.1-P Field mustard cytosol 52.27 46.75
Bra037030.1-P Field mustard cytosol 52.73 44.96
Zm00001d041393_P001 Maize extracellular 20.45 41.67
VIT_00s0194g00040.t01 Wine grape cytosol 11.36 6.17
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EnsemblPlantsGene:Bra028949EnsemblPlants:Bra028949.1EnsemblPlants:Bra028949.1-PInterPro:EF-hand-dom_pair
InterPro:EF_hand_domGO:GO:0003674GO:GO:0005488GO:GO:0005509GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005829GO:GO:0005840GO:GO:0008150
GO:GO:0009705GO:GO:0016020GO:GO:0022626GO:GO:0055075InterPro:IPR002048UniProt:M4EJI3
PFAM:PF13499PFAM:PF13833PRINTS:PR00450PFscan:PS50222PANTHER:PTHR23056PANTHER:PTHR23056:SF51
SMART:SM00054SUPFAM:SSF47473UniParc:UPI000253FE00:::
Description
AT5G55990 (E=1e-113) CBL2, ATCBL2 | CBL2 (CALCINEURIN B-LIKE 2); calcium ion binding
Coordinates
chrA03:-:5558718..5559893
Molecular Weight (calculated)
25153.1 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.245
Length
220 amino acids
Sequence
(BLAST)
001: MESYDLHKLS IMTQCIDGVK HLCTSVLGCF DLDLYKQSGG GLGDPELLSR DTVFSVSEIE ALYELFKKIS SAVIDDGLIN KEEFQLALFK TNKKESLFAD
101: RVFDLFDTKH NGILGFEEFA RALSVFHPNA PIDDKIQFSF QLYDLKQQGF IERQEVKQMV VATLAESGMN LKDTVIEDII DKTFEEADTK HDGKIDKEEW
201: RSLVLRHPSL LKNMTLQYLK
Best Arabidopsis Sequence Match ( AT5G55990.2 )
(BLAST)
001: MSQCVDGIKH LCTSVLGCFD LDLYKQSGGL GDPELLARDT VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIHFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLK DTVIEDIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
CBL2Calcineurin B-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS7]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.