Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67196 | Canola | cytosol | 44.44 | 68.57 |
| Zm00001d010931_P001 | Maize | cytosol | 29.63 | 38.1 |
| Zm00001d030955_P003 | Maize | cytosol | 60.19 | 28.89 |
| Zm00001d033295_P001 | Maize | cytosol | 59.26 | 28.44 |
| Bra026421.1-P | Field mustard | cytosol | 57.41 | 28.44 |
| KRH46425 | Soybean | endoplasmic reticulum | 58.33 | 27.88 |
| KRG98442 | Soybean | cytosol | 58.33 | 27.88 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 58.33 | 27.88 |
| Bra035598.1-P | Field mustard | cytosol | 57.41 | 27.43 |
| CDX89324 | Canola | cytosol | 57.41 | 27.43 |
| CDX92814 | Canola | cytosol | 57.41 | 27.43 |
| CDX94315 | Canola | cytosol | 57.41 | 27.43 |
| CDY06547 | Canola | cytosol | 57.41 | 27.43 |
| CDY42728 | Canola | cytosol | 57.41 | 27.43 |
| CDY64981 | Canola | cytosol | 57.41 | 27.43 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 56.48 | 26.99 |
| AT4G26570.2 | Thale cress | cytosol | 57.41 | 26.96 |
| CDY11963 | Canola | cytosol | 56.48 | 25.63 |
| Zm00001d023506_P001 | Maize | cytosol | 52.78 | 25.56 |
| Zm00001d023504_P001 | Maize | cytosol | 52.78 | 25.56 |
| CDY36774 | Canola | cytosol | 54.63 | 24.79 |
| Zm00001d029976_P004 | Maize | cytosol, mitochondrion | 44.44 | 22.54 |
| Bra028949.1-P | Field mustard | cytosol | 41.67 | 20.45 |
| Zm00001d000046_P001 | Maize | cytosol | 30.56 | 18.75 |
| CDX89325 | Canola | plastid | 46.3 | 18.18 |
| Zm00001d044389_P001 | Maize | cytosol | 38.89 | 17.8 |
| CDX94316 | Canola | plastid | 45.37 | 17.75 |
| Zm00001d053293_P001 | Maize | cytosol | 30.56 | 17.01 |
| Bra026422.1-P | Field mustard | cytosol, plastid | 33.33 | 14.4 |
| Zm00001d044285_P003 | Maize | plastid | 45.37 | 13.57 |
| Zm00001d038730_P001 | Maize | cytosol | 37.96 | 13.18 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 37.96 | 10.12 |
| Zm00001d041392_P001 | Maize | cytosol, extracellular | 11.11 | 7.02 |
| Zm00001d041921_P001 | Maize | cytosol | 0.93 | 1.22 |
Protein Annotations
| EnsemblPlants:Zm00001d041393_P001 | EnsemblPlants:Zm00001d041393_T001 | EnsemblPlantsGene:Zm00001d041393 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF57 |
| PFAM:PF13202 | PFscan:PS50222 | ProteinID:ONM32913.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47473 |
| TMHMM:TMhelix | UniParc:UPI000842F77F | UniProt:A0A1D6MVT1 | MapMan:35.1 | : | : |
Description
Calcineurin B-like protein 2
Coordinates
chr3:+:115711929..115715470
Molecular Weight (calculated)
12453.1 Da
IEP (calculated)
6.324
GRAVY (calculated)
0.179
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHECILFIS CCIVPCCCMT SVGLALEIIR LSSSCLLISN SLANFVFFCH YKTFEEADTK HDGRIDKEEW RNLVIRHPSL LKNMTLQYLK DITTTFPSFV
101: FHSQVDDN
101: FHSQVDDN
001: MSQCIDGFKH VCSSFFRCFD IDIYKQSGGL GDPELLARET VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRY QSQVFDLFDT
101: KHNGILGFEE FARALSVFHP NAPIEDKIDF SFQLYDLKQQ GFIERQEVKQ MVVATLAESG MNLSDEIIES IIDKTFEEAD TKHDGRIDKE EWRTLVLRHP
201: SLLKNMTLQY LKDITTTFPS FVFHSQVEDT
101: KHNGILGFEE FARALSVFHP NAPIEDKIDF SFQLYDLKQQ GFIERQEVKQ MVVATLAESG MNLSDEIIES IIDKTFEEAD TKHDGRIDKE EWRTLVLRHP
201: SLLKNMTLQY LKDITTTFPS FVFHSQVEDT
Arabidopsis Description
ATCBL3calcineurin B-like 3 [Source:TAIR;Acc:AT4G26570]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.