Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028949.1-P | Field mustard | cytosol | 90.76 | 98.18 |
| AT5G55990.1 | Thale cress | cytosol, extracellular | 92.44 | 97.35 |
| CDY36774 | Canola | cytosol | 97.06 | 97.06 |
| CDY64981 | Canola | cytosol | 92.02 | 96.9 |
| CDY06547 | Canola | cytosol | 92.02 | 96.9 |
| CDY62266 | Canola | cytosol | 19.33 | 95.83 |
| CDY67196 | Canola | cytosol | 28.15 | 95.71 |
| CDY42728 | Canola | cytosol | 87.39 | 92.04 |
| CDX92814 | Canola | cytosol | 87.39 | 92.04 |
| CDX89324 | Canola | cytosol | 86.55 | 91.15 |
| CDX94315 | Canola | cytosol | 86.55 | 91.15 |
| Solyc07g065820.2.1 | Tomato | cytosol | 83.19 | 90.41 |
| PGSC0003DMT400057342 | Potato | cytosol, extracellular | 82.77 | 89.95 |
| KRH46425 | Soybean | endoplasmic reticulum | 84.45 | 88.94 |
| Os03t0626800-01 | Rice | cytosol | 84.03 | 88.89 |
| KRG98442 | Soybean | cytosol | 84.03 | 88.5 |
| GSMUA_Achr9P12840_001 | Banana | cytosol | 83.61 | 88.05 |
| Solyc12g015870.1.1 | Tomato | cytosol | 82.77 | 87.95 |
| PGSC0003DMT400076653 | Potato | cytosol | 82.77 | 87.95 |
| Zm00001d033295_P001 | Maize | cytosol | 82.77 | 87.56 |
| TraesCS4D01G068700.1 | Wheat | cytosol | 81.93 | 86.67 |
| TraesCS4A01G245500.1 | Wheat | cytosol | 81.51 | 86.22 |
| HORVU5Hr1G016320.1 | Barley | cytosol | 81.09 | 85.78 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 81.09 | 85.78 |
| TraesCS5D01G072100.1 | Wheat | cytosol | 81.09 | 85.78 |
| TraesCS5A01G060600.1 | Wheat | cytosol | 81.09 | 85.78 |
| PGSC0003DMT400037245 | Potato | cytosol | 79.83 | 85.59 |
| Os12t0597000-01 | Rice | plasma membrane, vacuole | 80.67 | 85.33 |
| HORVU4Hr1G011670.1 | Barley | vacuole | 80.67 | 85.33 |
| OQU79501 | Sorghum | cytosol | 79.83 | 84.44 |
| Zm00001d030955_P003 | Maize | cytosol | 79.83 | 84.44 |
| Zm00001d041392_P001 | Maize | cytosol, extracellular | 57.56 | 80.12 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 75.63 | 69.23 |
| CDY34452 | Canola | cytosol, extracellular | 65.55 | 68.72 |
| CDY32236 | Canola | cytosol, extracellular | 65.13 | 68.28 |
| CDX90465 | Canola | cytosol | 54.62 | 61.03 |
| CDY40580 | Canola | cytosol | 54.2 | 60.56 |
| CDY09616 | Canola | cytosol | 54.2 | 60.56 |
| CDY38412 | Canola | cytosol | 53.78 | 60.09 |
| CDY28977 | Canola | cytosol | 53.78 | 60.09 |
| CDY25987 | Canola | cytosol | 53.36 | 59.62 |
| CDY69850 | Canola | cytosol | 53.36 | 59.62 |
| CDX78784 | Canola | cytosol | 53.36 | 59.62 |
| CDX89325 | Canola | plastid | 67.65 | 58.55 |
| Zm00001d041393_P001 | Maize | extracellular | 25.63 | 56.48 |
| CDY19840 | Canola | cytosol | 51.26 | 55.96 |
| CDY04300 | Canola | cytosol | 30.67 | 55.73 |
| CDX80425 | Canola | cytosol | 50.84 | 54.75 |
| CDX87133 | Canola | cytosol | 48.74 | 53.7 |
| CDX94316 | Canola | plastid | 62.18 | 53.62 |
| CDY59968 | Canola | cytosol, plasma membrane | 49.58 | 53.39 |
| CDY44281 | Canola | cytosol | 49.58 | 53.39 |
| CDY46533 | Canola | mitochondrion | 46.22 | 51.4 |
| CDY64882 | Canola | mitochondrion | 46.22 | 51.4 |
| CDY28278 | Canola | cytosol | 52.52 | 50.81 |
| CDY45024 | Canola | cytosol | 52.52 | 50.81 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 52.94 | 50.6 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 52.94 | 50.6 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 44.12 | 48.39 |
| CDX72384 | Canola | cytosol | 53.36 | 47.57 |
| CDY56859 | Canola | cytosol | 40.34 | 46.83 |
| CDX92464 | Canola | cytosol | 39.5 | 45.85 |
| VIT_00s0194g00040.t01 | Wine grape | cytosol | 17.65 | 10.37 |
Protein Annotations
| EnsemblPlants:CDY11963 | EnsemblPlantsGene:GSBRNA2T00060812001 | Gene3D:1.10.238.10 | GO:A0A078FIN3 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF51 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | ProteinID:CDY11963 | ProteinID:CDY11963.1 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EB8544 | UniProt:A0A078FIN3 | MapMan:35.1 | : |
Description
BnaC03g13890DBnaC03g13890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIN3]
Coordinates
chrLK032015:-:629415..631683
Molecular Weight (calculated)
27184.4 Da
IEP (calculated)
4.750
GRAVY (calculated)
-0.215
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYDLHKVS IMTQCIDGVK HLCTSVLGCF DLNLFKQSGG GLGDPELLSR DTVFSVSEIE ALYELFKKIS SAVIDDGLIN KEEFQLALFK TNKKESLFAD
101: RVFDLFDTKH NGILGFEEFA RALSVFHPNA PIDDKIHFSF QLYDLKQQGF IERQEVKQMV VATLAESGMN LKDTVIEDII DKTFEEADTK HDGKIDKEEW
201: RSLVLRHPSL LKNMTLQYLK DITTTFPSFV FHSQVEDT
101: RVFDLFDTKH NGILGFEEFA RALSVFHPNA PIDDKIHFSF QLYDLKQQGF IERQEVKQMV VATLAESGMN LKDTVIEDII DKTFEEADTK HDGKIDKEEW
201: RSLVLRHPSL LKNMTLQYLK DITTTFPSFV FHSQVEDT
001: MSQCVDGIKH LCTSVLGCFD LDLYKQSGGL GDPELLARDT VFSVSEIEAL YELFKKISSA VIDDGLINKE EFQLALFKTN KKESLFADRV FDLFDTKHNG
101: ILGFEEFARA LSVFHPNAPI DDKIHFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLK DTVIEDIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
101: ILGFEEFARA LSVFHPNAPI DDKIHFSFQL YDLKQQGFIE RQEVKQMVVA TLAESGMNLK DTVIEDIIDK TFEEADTKHD GKIDKEEWRS LVLRHPSLLK
201: NMTLQYLKDI TTTFPSFVFH SQVEDT
Arabidopsis Description
CBL2Calcineurin B-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS7]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.