CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY11963
CDY36774

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34180.1	CDY11963	AT5G55990.1	11230129
AT2G34180.1	CDY36774	AT5G55990.1	11230129
AT2G34180.1	CDY11963	AT5G55990.1	14730130
AT2G34180.1	CDY36774	AT5G55990.1	14730130

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68813	Canola	mitochondrion	98.28	98.28
CDY63139	Canola	cytosol	87.12	85.29
CDY17228	Canola	cytosol, mitochondrion, plastid	83.91	83.55
CDY67391	Canola	cytosol	84.33	82.05
CDY37668	Canola	vacuole	83.69	77.84
AT2G34180.1	Thale cress	plastid	83.26	77.29
CDY43329	Canola	cytosol	73.39	66.41
CDX90179	Canola	cytosol, plastid	74.03	65.84
CDY69878	Canola	cytosol	59.87	64.73
CDX78885	Canola	cytosol	62.23	62.1
CDX99438	Canola	cytosol	62.02	61.75
CDY67623	Canola	cytosol	58.58	60.26
CDY70469	Canola	cytosol	61.16	59.38
HORVU6Hr1G054210.3	Barley	cytosol	55.36	58.9
EES03646	Sorghum	plastid	62.23	55.88
CDY23269	Canola	cytosol	45.92	53.77
CDY13400	Canola	cytosol	46.57	53.58
CDX72282	Canola	cytosol	46.35	53.2
OQU78296	Sorghum	plastid	57.73	53.16
Os05t0514200-01	Rice	cytosol, plastid	57.94	53.15
CDY28231	Canola	cytosol	47.42	53.12
CDX68708	Canola	cytosol	47.42	53.12
Zm00001d038690_P001	Maize	cytosol	57.3	53.08
TraesCS3A01G305900.1	Wheat	plastid	59.44	53.07
TraesCS3B01G330600.1	Wheat	plastid	59.23	52.57
Zm00001d010743_P001	Maize	cytosol, plastid	57.3	52.46
CDY36461	Canola	cytosol	46.14	52.44
Zm00001d012696_P001	Maize	plastid	57.94	52.22
Zm00001d043389_P003	Maize	cytosol, plastid	61.37	52.19
HORVU1Hr1G076910.3	Barley	cytosol, plastid	56.65	51.76
CDY26359	Canola	cytosol	47.85	51.26
CDY34052	Canola	cytosol	55.36	50.99
CDY32704	Canola	cytosol	47.85	50.91
TraesCS1B01G347100.1	Wheat	plastid	56.65	50.87
CDY24005	Canola	cytosol	45.92	50.71
TraesCS1A01G333800.1	Wheat	plastid	56.65	50.67
EES02274	Sorghum	cytosol	55.79	50.58
CDY02816	Canola	cytosol	47.85	50.34
HORVU3Hr1G025810.1	Barley	cytosol	55.15	50.29
TraesCS3B01G153800.1	Wheat	mitochondrion	56.01	50.29
TraesCS3D01G136700.1	Wheat	mitochondrion	55.79	50.0
Os01t0759400-02	Rice	cytosol, plastid	57.94	50.0
CDX84840	Canola	cytosol	45.71	49.88
CDX97067	Canola	cytosol	43.99	49.76
CDY29680	Canola	cytosol	40.99	49.74
CDY04829	Canola	cytosol	45.06	49.65
CDY54010	Canola	cytosol	40.77	49.61
CDY04828	Canola	cytosol	45.71	49.42
Os01t0206300-00	Rice	cytosol	54.08	49.32
CDY70046	Canola	cytosol	48.71	49.24
CDY43857	Canola	cytosol	48.71	49.24
TraesCS3A01G135700.1	Wheat	mitochondrion	55.15	49.23
CDY68071	Canola	cytosol	45.71	49.08
Zm00001d008899_P001	Maize	cytosol	54.08	48.93
CDY05014	Canola	cytosol	45.71	48.52
CDX99009	Canola	cytosol	48.07	48.38
CDX69798	Canola	cytosol	44.85	48.27
CDY14057	Canola	cytosol	45.28	48.17
CDX70006	Canola	cytosol	47.85	47.96
HORVU3Hr1G073100.2	Barley	cytosol	59.23	47.92
CDX80487	Canola	cytosol	46.78	47.91
CDY69661	Canola	cytosol	46.78	47.7
CDY02060	Canola	cytosol	45.28	47.63
TraesCS3D01G296000.1	Wheat	plastid	36.05	47.59
CDX70005	Canola	cytosol	44.42	47.05
CDX99010	Canola	cytosol	44.64	46.64
CDY65565	Canola	cytosol	41.85	45.67
CDX91471	Canola	cytosol	41.85	45.67
CDY67622	Canola	cytosol	27.04	44.84
CDY07727	Canola	cytosol	40.77	44.19
CDY64718	Canola	cytosol	42.92	43.76
CDY14457	Canola	cytosol	40.34	43.72
CDX87763	Canola	plasma membrane	36.7	43.4
CDY53472	Canola	cytosol	42.92	43.38

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	GO:A0A078JSJ6	UniProt:A0A078JSJ6	EnsemblPlants:CDY68616	ProteinID:CDY68616
ProteinID:CDY68616.1	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00076025001	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF19	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEFA49	SEG:seg

Description

BnaCnng59780DNon-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A078JSJ6]

Coordinates

chrLK037661:-:2176..3682

Molecular Weight (calculated)

52471.0 Da

IEP (calculated)

9.748

GRAVY (calculated)

-0.210

Length

466 amino acids

Sequence
(BLAST)

001: MALRLLGRIV TKAVKKENSP ESPRSPKTPQ GSVLMDKYEL GKLLGQGSFA KVYLARSIST GENVAIKVID KEKIVKSGLA GHIKREISIL RRVRHPYIVH
101: LLEVMATKTK IYIVMEFVRG GDLLGKVSKG RLRQGVARSY FQQLISSVSF CHSRGVYHRD LKLENLLLDD EGNLKVSDFG LSIVSEQLRQ DGICQTFCGT
201: PAYLAPEVLT MKGYDAAKAD VWSCGVILFV LMAGYLPFED KNIMVMYKKI HKGKFRCPKW FSPELTRLLT RILDTNPDTR ITIPEIRKHR WFKKGEDESS
301: SVSSGRSSTA SEGDAEFEIK RVGSMPRPTS LNAFDIISFS YGFDLSSFFE EGGQGARFVS AAPVTKIISK LEDIAILANF TVRKKDWSVR LEGSREGAKG
401: PLIIKVEIFE LTPSLVVVEV KKKGGFIEEY EEFCNKELRP QLEKLMHYQA NEVEVAMVLR PETEER

Best Arabidopsis Sequence Match ( AT1G29230.1 )
(BLAST)

001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE

Arabidopsis Description

CIPK18Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WD98]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.