CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY11963
CDY25987
CDY28977
CDY36774
CDY40580
CDY69850

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G29230.1	CDY25987	AT5G47100.1	14730064
AT1G29230.1	CDY28977	AT5G47100.1	14730064
AT1G29230.1	CDY40580	AT5G47100.1	14730064
AT1G29230.1	CDY69850	AT5G47100.1	14730064
AT1G29230.1	CDY25987	AT5G47100.1	14730130
AT1G29230.1	CDY28977	AT5G47100.1	14730130
AT1G29230.1	CDY40580	AT5G47100.1	14730130
AT1G29230.1	CDY69850	AT5G47100.1	14730130
AT1G29230.1	CDY11963	AT5G55990.1	14730130
AT1G29230.1	CDY36774	AT5G55990.1	14730130

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010841.1-P	Field mustard	cytosol, plastid	98.86	98.86
CDY43329	Canola	cytosol	96.37	98.06
AT1G29230.1	Thale cress	cytosol, plastid	89.12	89.81
CDY17228	Canola	cytosol, mitochondrion, plastid	67.94	76.07
CDY67391	Canola	cytosol	68.89	75.37
CDY68813	Canola	mitochondrion	66.22	74.46
CDY63139	Canola	cytosol	67.56	74.37
CDY68616	Canola	cytosol, mitochondrion	65.84	74.03
CDY37668	Canola	vacuole	70.42	73.65
CDY69878	Canola	cytosol	58.59	71.23
CDX99438	Canola	cytosol	62.4	69.87
CDX78885	Canola	cytosol	62.02	69.59
CDY70469	Canola	cytosol	62.21	67.92
CDY67623	Canola	cytosol	58.59	67.77
HORVU6Hr1G054210.3	Barley	cytosol	53.63	64.16
EES03646	Sorghum	plastid	60.5	61.08
Zm00001d038690_P001	Maize	cytosol	57.82	60.24
OQU78296	Sorghum	plastid	57.63	59.68
Os05t0514200-01	Rice	cytosol, plastid	57.63	59.45
Zm00001d010743_P001	Maize	cytosol, plastid	57.44	59.14
TraesCS3A01G305900.1	Wheat	plastid	58.59	58.81
TraesCS3B01G330600.1	Wheat	plastid	58.78	58.67
HORVU1Hr1G076910.3	Barley	cytosol, plastid	56.87	58.43
Zm00001d012696_P001	Maize	plastid	57.25	58.03
TraesCS1B01G347100.1	Wheat	plastid	56.87	57.42
TraesCS1A01G333800.1	Wheat	plastid	56.87	57.2
Zm00001d043389_P003	Maize	cytosol, plastid	59.73	57.12
CDY13400	Canola	cytosol	44.08	57.04
CDX72282	Canola	cytosol	44.08	56.9
CDY28231	Canola	cytosol	44.85	56.49
CDX68708	Canola	cytosol	44.85	56.49
CDY23269	Canola	cytosol	42.75	56.28
CDY34052	Canola	cytosol	54.2	56.13
CDY36461	Canola	cytosol	43.51	55.61
Os01t0759400-02	Rice	cytosol, plastid	56.49	54.81
CDY68071	Canola	cytosol	45.23	54.61
CDY24005	Canola	cytosol	43.89	54.5
TraesCS3D01G296000.1	Wheat	plastid	36.64	54.39
CDX84840	Canola	cytosol	44.27	54.33
CDY26359	Canola	cytosol	44.85	54.02
CDY29680	Canola	cytosol	39.31	53.65
HORVU3Hr1G073100.2	Barley	cytosol	58.97	53.65
CDY02060	Canola	cytosol	45.23	53.5
CDY54010	Canola	cytosol	38.93	53.26
CDY32704	Canola	cytosol	44.08	52.74
CDY04829	Canola	cytosol	42.56	52.72
HORVU3Hr1G025810.1	Barley	cytosol	51.34	52.64
CDY02816	Canola	cytosol	44.47	52.6
CDY04828	Canola	cytosol	43.13	52.44
TraesCS3B01G153800.1	Wheat	mitochondrion	51.91	52.41
EES02274	Sorghum	cytosol	51.34	52.33
CDX97067	Canola	cytosol	41.03	52.18
TraesCS3D01G136700.1	Wheat	mitochondrion	51.72	52.12
Os01t0206300-00	Rice	cytosol	50.38	51.66
TraesCS3A01G135700.1	Wheat	mitochondrion	51.15	51.34
Zm00001d008899_P001	Maize	cytosol	50.0	50.87
CDY05014	Canola	cytosol	42.37	50.57
CDX69798	Canola	cytosol	41.6	50.35
CDY70046	Canola	cytosol	44.27	50.33
CDY43857	Canola	cytosol	44.27	50.33
CDY14057	Canola	cytosol	41.98	50.23
CDX70005	Canola	cytosol	41.98	50.0
CDX99010	Canola	cytosol	42.37	49.78
CDX99009	Canola	cytosol	43.89	49.68
CDX80487	Canola	cytosol	43.13	49.67
CDX70006	Canola	cytosol	43.7	49.25
CDY69661	Canola	cytosol	42.94	49.23
CDX91471	Canola	cytosol	38.93	47.78
CDY65565	Canola	cytosol	38.74	47.54
CDY07727	Canola	cytosol	38.74	47.21
CDY14457	Canola	cytosol	38.36	46.74
CDY64718	Canola	cytosol	40.27	46.17
CDY53472	Canola	cytosol	40.27	45.77
CDY67622	Canola	cytosol	24.43	45.55
CDX87763	Canola	plasma membrane	33.59	44.67

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	GO:A0A078DNV0	EnsemblPlants:CDX90179	ProteinID:CDX90179	ProteinID:CDX90179.1
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00150726001
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895
PANTHER:PTHR43895:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEA2D7	SEG:seg	:	:	:	:

Description

BnaA08g18050D

Coordinates

chrLK031862:-:490040..491614

Molecular Weight (calculated)

58876.3 Da

IEP (calculated)

8.089

GRAVY (calculated)

-0.288

Length

524 amino acids

Sequence
(BLAST)

001: MSNALAPPPL LVVTTVVPDP PHPPPPPQQK PYALQYVTEL LSRIGIKDTD KDGNISPQSP RSPRNNILMG KYELGKLLGH GTFAKVYLAL NIKSGENVAI
101: KVIDKEKIMK SGLVAHIKRE ISILRRVRHP YVVHLFEVMA TKTKIYFVME YVPGGELFNK VAKGRLPEDT ARRYFQQLIS SVSFCHGRGV YHRDLKPENL
201: LLDAKGNLKV SDFGLSAVAE QLRIDGLCHT FCGTPAYLAP EVLTRKGYDA AKADVWSCGV ILFVLMAGHI PFYDKNIMAM YKKIYKGEFR CPRWFSSDLI
301: RLLTRLLDTN PDTRITIPEI MKSRWFKKGF KHVKFYIEDD KLCREDEEEE EESYSSGRSS TVSESDAEFD VKRIGSMPRP ASLNAFDIIS FSSGFDLSGL
401: FEEGGEGTRF LSGAPVSEII AKLEEIARVV SFTVRKKEWS LRLEGCREGA KGPLTIGAEI FELTPSLVVV EVKQKGGDRD EYEEFCNKKL RPELEKLMHN
501: RGGDKGKGDV VVEEEAMCLP CDTV

Best Arabidopsis Sequence Match ( AT1G29230.1 )
(BLAST)

001: MAQALAQPPL VVTTVVPDPP PPPPPPHPKP YALRYMADLL GRIGIMDTDK DGNISPQSPR SPRSPRNNIL MGKYELGKLL GHGTFAKVYL AQNIKSGDKV
101: AIKVIDKEKI MKSGLVAHIK REISILRRVR HPYIVHLFEV MATKSKIYFV MEYVGGGELF NTVAKGRLPE ETARRYFQQL ISSVSFCHGR GVYHRDLKPE
201: NLLLDNKGNL KVSDFGLSAV AEQLRQDGLC HTFCGTPAYI APEVLTRKGY DAAKADVWSC GVILFVLMAG HIPFYDKNIM VMYKKIYKGE FRCPRWFSSD
301: LVRLLTRLLD TNPDTRITIP EIMKNRWFKK GFKHVKFYIE DDKLCREDED EEEEASSSGR SSTVSESDAE FDVKRMGIGS MPRPSSLNAF DIISFSSGFD
401: LSGLFEEEGG EGTRFVSGAP VSKIISKLEE IAKIVSFTVR KKEWSLRLEG CREGAKGPLT IAAEIFELTP SLVVVEVKKK GGDREEYEEF CNKELRPELE
501: KLIHEEVVVE EALYLPSDTE

Arabidopsis Description

CIPK18Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178WD98]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.