CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX92464
CDY11963
CDY36774
CDY56859

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07070.1	CDX92464	AT4G01420.1	11230129
AT5G07070.1	CDY56859	AT4G01420.1	11230129
AT5G07070.1	CDY11963	AT5G55990.1	11230129
AT5G07070.1	CDY36774	AT5G55990.1	11230129

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009293.1-P	Field mustard	cytosol	100.0	100.0
CDX99009	Canola	cytosol	97.85	98.27
AT5G07070.1	Thale cress	cytosol	82.8	84.43
CDY70046	Canola	cytosol	78.49	79.18
CDY43857	Canola	cytosol	78.28	78.96
CDY32704	Canola	cytosol	73.98	78.54
CDY02816	Canola	cytosol	74.62	78.33
CDX70005	Canola	cytosol	71.18	75.23
CDX99010	Canola	cytosol	71.83	74.89
CDY14057	Canola	cytosol	70.32	74.66
CDY05014	Canola	cytosol	70.32	74.49
VIT_06s0004g07830.t01	Wine grape	cytosol	65.38	67.86
GSMUA_Achr7P22140_001	Banana	cytosol	52.26	65.85
KRH72808	Soybean	cytosol	63.66	63.93
KRG98172	Soybean	cytosol	62.8	63.2
Solyc06g007430.1.1	Tomato	cytosol	64.73	62.97
PGSC0003DMT400052958	Potato	cytosol	63.01	62.34
KRH30131	Soybean	cytosol	61.72	62.12
EES09124	Sorghum	cytosol	57.85	60.72
EES15653	Sorghum	cytosol	57.85	60.45
CDY26359	Canola	cytosol	56.34	60.23
CDY04829	Canola	cytosol	54.41	59.81
TraesCS4B01G120400.1	Wheat	cytosol, mitochondrion	56.99	59.68
Os05t0476350-00	Rice	cytosol	55.7	59.54
HORVU4Hr1G022630.1	Barley	cytosol, mitochondrion	56.56	59.23
EES06320	Sorghum	cytosol	58.71	59.22
Zm00001d052340_P001	Maize	cytosol	56.34	59.14
Os12t0113500-01	Rice	cytosol	55.48	58.77
Os11t0113700-01	Rice	cytosol	54.84	58.76
TraesCS4A01G194800.1	Wheat	cytosol	56.56	58.57
TraesCS4D01G118500.2	Wheat	cytosol	56.56	58.57
HORVU0Hr1G015380.1	Barley	cytosol	57.85	57.85
TraesCS5B01G146500.1	Wheat	cytosol	53.55	57.51
TraesCS5D01G144800.1	Wheat	cytosol	53.98	57.31
HORVU5Hr1G046880.1	Barley	cytosol	54.19	57.27
TraesCS5A01G148000.1	Wheat	cytosol	53.76	57.08
CDY23269	Canola	cytosol	48.82	57.04
EES19682	Sorghum	cytosol	55.91	57.02
Zm00001d015325_P001	Maize	cytosol	57.2	56.6
CDX72282	Canola	cytosol	49.25	56.4
HORVU5Hr1G046830.3	Barley	cytosol	54.19	56.38
CDY36461	Canola	cytosol	49.68	56.34
CDY13400	Canola	cytosol	48.82	56.05
CDX68708	Canola	cytosol	50.11	56.01
CDY28231	Canola	cytosol	50.11	56.01
TraesCS6A01G135100.1	Wheat	cytosol	57.63	55.72
CDX97067	Canola	cytosol	49.25	55.58
TraesCS6D01G124200.1	Wheat	cytosol	58.06	55.56
CDY69878	Canola	cytosol	51.4	55.45
TraesCS1B01G309400.1	Wheat	cytosol	55.91	55.08
Os01t0824600-01	Rice	cytosol	59.14	54.78
TraesCS1D01G298500.1	Wheat	cytosol	55.48	54.66
TraesCS6B01G163100.1	Wheat	cytosol	57.63	54.58
Zm00001d052544_P001	Maize	cytosol	50.11	54.57
Os02t0161000-01	Rice	cytosol	57.85	54.56
Zm00001d023360_P001	Maize	cytosol	50.32	54.42
Zm00001d023353_P001	Maize	cytosol	50.11	54.31
KXG33627	Sorghum	cytosol	60.22	54.26
TraesCS3A01G346100.1	Wheat	cytosol	59.14	54.24
TraesCS1A01G299600.1	Wheat	cytosol	55.05	54.24
Zm00001d023365_P001	Maize	cytosol	50.32	54.17
TraesCS3D01G339800.1	Wheat	cytosol	58.92	54.04
HORVU3Hr1G081420.1	Barley	cytosol	58.92	53.83
CDX69798	Canola	cytosol	50.11	53.81
TraesCS3B01G377800.1	Wheat	cytosol	58.49	53.65
Zm00001d008833_P001	Maize	cytosol	49.46	53.24
Zm00001d010459_P001	Maize	cytosol	51.4	53.11
Zm00001d023631_P001	Maize	cytosol	51.4	53.11
CDX99438	Canola	cytosol	53.12	52.78
CDY67623	Canola	cytosol	51.4	52.76
CDX78885	Canola	cytosol	52.47	52.25
CDX87763	Canola	plasma membrane	44.09	52.03
HORVU1Hr1G070100.9	Barley	cytosol	55.48	51.91
CDX80487	Canola	cytosol	50.54	51.65
CDY69661	Canola	cytosol	50.54	51.42
CDY67622	Canola	cytosol	30.54	50.53
CDY70469	Canola	cytosol	51.61	50.0
CDY64718	Canola	cytosol	47.53	48.36
CDY68616	Canola	cytosol, mitochondrion	47.96	47.85
CDY53472	Canola	cytosol	47.31	47.72
CDY68813	Canola	mitochondrion	47.53	47.42
CDY17228	Canola	cytosol, mitochondrion, plastid	47.53	47.22
CDY24005	Canola	cytosol	42.8	47.16
CDY04828	Canola	cytosol	43.66	47.1
Zm00001d007101_P001	Maize	cytosol	31.4	46.95
CDY63139	Canola	cytosol	47.96	46.85
CDX84840	Canola	cytosol	43.01	46.84
CDY68071	Canola	cytosol	43.01	46.08
CDX91471	Canola	cytosol	41.72	45.43
CDY65565	Canola	cytosol	41.72	45.43
CDY02060	Canola	cytosol	43.23	45.37
CDY29680	Canola	cytosol	37.42	45.31
CDY67391	Canola	cytosol	46.67	45.3
CDY54010	Canola	cytosol	36.99	44.91
CDY43329	Canola	cytosol	48.82	44.08
CDY34052	Canola	cytosol	47.74	43.87
CDX90179	Canola	cytosol, plastid	49.25	43.7
CDY37668	Canola	vacuole	46.88	43.51
CDY07727	Canola	cytosol	39.57	42.79
CDY14457	Canola	cytosol	39.14	42.33
Zm00001d043038_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	57.85	27.04

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.310.80	GO:A0A078BZ62	EnsemblPlants:CDX70006	ProteinID:CDX70006	ProteinID:CDX70006.1
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00136100001
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069
PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816
PANTHER:PTHR43895	PANTHER:PTHR43895:SF16	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254397F	SEG:seg	:	:	:

Description

BnaA10g23550D

Coordinates

chrLK031790:-:2668722..2670569

Molecular Weight (calculated)

52512.0 Da

IEP (calculated)

7.582

GRAVY (calculated)

-0.425

Length

465 amino acids

Sequence
(BLAST)

001: MENKPSVLTD RYEVGRLLGQ GTFAKVYYGR SVHTNESVAI KMIDKEKVLR VGLSDQIKRE ISVMRIAKHP NVVSLHEVMA TKSRIYFVIE YCKGGELFNK
101: VKKGKLREDV AWKYFHQLIN AVDFCHSRGV YHRDIKPENL LLDDNENLKV SDFGLSALAD CKRADGLLHT TCGTPAYVAP EVINRKGYDG TKADIWSCGV
201: VLFVLLAGYL PFHDSNLMEM YRKIGKADFK CPNWFAPEAK RLLCKMLDPN HESRISIARI RESSWFRKGL HLKQKKMDKQ LRETTVIPTV EVGESSGSSS
301: ENGDSLHEEA PAQLAYLNAF DIISLSAGFD LGGLFGDAND KRESRFASRK PAAEIISKLE EVARGLNLKI RKQDAGLFKL EGSKEGRKGA LSMDAEIFQV
401: TQTFHLVEVK KCDGDTVEYQ RLVEEDLRPA LGDVVWVWQG DKEKEEQLKL GLQDEQGVEQ HSEPL

Best Arabidopsis Sequence Match ( AT5G07070.1 )
(BLAST)

001: MENKPSVLTE RYEVGRLLGQ GTFAKVYFGR SNHTNESVAI KMIDKDKVMR VGLSQQIKRE ISVMRIAKHP NVVELYEVMA TKSRIYFVIE YCKGGELFNK
101: VAKGKLKEDV AWKYFYQLIS AVDFCHSRGV YHRDIKPENL LLDDNDNLKV SDFGLSALAD CKRQDGLLHT TCGTPAYVAP EVINRKGYEG TKADIWSCGV
201: VLFVLLAGYL PFHDTNLMEM YRKIGKADFK CPSWFAPEVK RLLCKMLDPN HETRITIAKI KESSWFRKGL HLKQKKMEKM EKQQVREATN PMEAGGSGQN
301: ENGENHEPPR LATLNAFDII ALSTGFGLAG LFGDVYDKRE SRFASQKPAS EIISKLVEVA KCLKLKIRKQ GAGLFKLERV KEGKNGILTM DAEIFQVTPT
401: FHLVEVKKCN GDTMEYQKLV EEDLRPALAD IVWVWQGEKE KEEQLLQDEQ GEQEPS

Arabidopsis Description

CIPK2Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178URC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.