Factsheet for VIT_06s0004g07830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0025g01630.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07070.1	VIT_02s0025g01630.t01	AT4G01420.1	11230129
AT5G07070.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129
AT5G58380.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G58380.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G58380.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT5G58380.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT5G58380.1	VIT_02s0236g00140.t01	AT5G47100.1	21798944
AT5G58380.1	VIT_02s0236g00150.t01	AT5G47100.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0058g01040.t01	Wine grape	cytosol	76.56	74.24
VIT_13s0067g02480.t01	Wine grape	cytosol	75.22	72.63
GSMUA_Achr7P22140_001	Banana	cytosol	58.71	71.27
CDY02816	Canola	cytosol	67.41	68.17
CDY32704	Canola	cytosol	66.52	68.04
Solyc06g007430.1.1	Tomato	cytosol	72.32	67.78
KRH72808	Soybean	cytosol	69.87	67.6
PGSC0003DMT400052958	Potato	cytosol	70.76	67.45
Bra020371.1-P	Field mustard	cytosol	66.29	67.04
AT5G07070.1	Thale cress	cytosol	68.08	66.89
Bra002654.1-P	Field mustard	cytosol	68.97	66.88
CDY70046	Canola	cytosol	68.75	66.81
CDY43857	Canola	cytosol	68.75	66.81
KRG98172	Soybean	cytosol	68.53	66.45
AT5G58380.1	Thale cress	cytosol	70.31	65.76
Bra009293.1-P	Field mustard	cytosol	67.86	65.38
CDX70006	Canola	cytosol	67.86	65.38
KRH30131	Soybean	cytosol	67.19	65.15
CDX99009	Canola	cytosol	67.19	65.01
Bra009294.1-P	Field mustard	cytosol	62.5	63.64
EES09124	Sorghum	cytosol	62.72	63.43
CDX70005	Canola	cytosol	62.28	63.41
Os12t0113500-01	Rice	cytosol	62.05	63.33
CDX99010	Canola	cytosol	62.95	63.23
Os11t0113700-01	Rice	cytosol	61.16	63.13
Os05t0476350-00	Rice	cytosol	61.16	62.99
VIT_10s0003g01410.t01	Wine grape	cytosol	65.62	62.95
Bra028709.1-P	Field mustard	cytosol	61.38	62.64
CDY14057	Canola	cytosol	61.16	62.56
CDY05014	Canola	cytosol	61.16	62.41
EES15653	Sorghum	cytosol	61.83	62.25
TraesCS4B01G120400.1	Wheat	cytosol, mitochondrion	61.38	61.94
TraesCS5B01G146500.1	Wheat	cytosol	59.82	61.89
TraesCS5A01G148000.1	Wheat	cytosol	60.27	61.64
HORVU5Hr1G046880.1	Barley	cytosol	60.49	61.59
HORVU4Hr1G022630.1	Barley	cytosol, mitochondrion	60.94	61.49
EES19682	Sorghum	cytosol	62.5	61.4
TraesCS4D01G118500.2	Wheat	cytosol	61.38	61.25
TraesCS4A01G194800.1	Wheat	cytosol	61.38	61.25
TraesCS5D01G144800.1	Wheat	cytosol	59.82	61.19
Zm00001d052340_P001	Maize	cytosol	60.49	61.17
EES06320	Sorghum	cytosol	62.72	60.95
HORVU5Hr1G046830.3	Barley	cytosol	60.49	60.63
HORVU0Hr1G015380.1	Barley	cytosol	62.72	60.43
VIT_11s0016g00200.t01	Wine grape	cytosol	57.37	60.33
TraesCS6A01G135100.1	Wheat	cytosol	63.17	58.84
TraesCS6D01G124200.1	Wheat	cytosol	63.39	58.44
TraesCS1D01G298500.1	Wheat	cytosol	60.94	57.84
TraesCS1A01G299600.1	Wheat	cytosol	60.94	57.84
Os02t0161000-01	Rice	cytosol	63.62	57.81
TraesCS1B01G309400.1	Wheat	cytosol	60.71	57.63
TraesCS6B01G163100.1	Wheat	cytosol	62.95	57.43
Zm00001d015325_P001	Maize	cytosol	60.04	57.23
Os01t0824600-01	Rice	cytosol	64.06	57.17
Zm00001d052544_P001	Maize	cytosol	54.24	56.91
VIT_04s0008g05770.t01	Wine grape	cytosol	56.25	56.38
Zm00001d023353_P001	Maize	cytosol	53.79	56.18
Zm00001d023360_P001	Maize	cytosol	53.79	56.05
TraesCS3D01G339800.1	Wheat	cytosol	63.39	56.02
TraesCS3A01G346100.1	Wheat	cytosol	63.17	55.82
Zm00001d008833_P001	Maize	cytosol	53.57	55.56
Zm00001d023365_P001	Maize	cytosol	53.57	55.56
VIT_09s0070g00160.t01	Wine grape	cytosol	49.33	55.53
HORVU3Hr1G081420.1	Barley	cytosol	62.95	55.4
Zm00001d023631_P001	Maize	cytosol	55.58	55.33
KXG33627	Sorghum	cytosol	63.62	55.23
TraesCS3B01G377800.1	Wheat	cytosol	62.28	55.03
Zm00001d010459_P001	Maize	cytosol	55.13	54.89
HORVU1Hr1G070100.9	Barley	cytosol	60.71	54.73
VIT_10s0003g01420.t01	Wine grape	cytosol	57.14	54.47
VIT_09s0070g00140.t01	Wine grape	cytosol	53.35	51.84
VIT_06s0004g07870.t01	Wine grape	cytosol	48.88	50.23
Zm00001d007101_P001	Maize	cytosol	33.71	48.55
VIT_08s0058g01090.t01	Wine grape	cytosol	46.88	45.75
Zm00001d043038_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	62.72	28.24

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100244972	wikigene:100244972	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	ProteinID:ACQ83527
ProteinID:ACQ83527.1	ProteinID:CCB43413	ProteinID:CCB43413.1	EntrezGene:CIPK11	wikigene:CIPK11	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase
UniProt:F6GUC6	EMBL:FJ901239	EMBL:FN594951	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0018107	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF2	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC52046	UniParc:UPI0001983731
ArrayExpress:VIT_06s0004g07830	EnsemblPlantsGene:VIT_06s0004g07830	EnsemblPlants:VIT_06s0004g07830.t01	unigene:Vvi.11224	RefSeq:XP_010650780.1	RefSeq:XP_010650781.1
RefSeq:XP_010650782.1	RefSeq:XP_010650783.1	SEG:seg	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6GUC6]

Coordinates

chr6:+:8606264..8607884

Molecular Weight (calculated)

50669.7 Da

IEP (calculated)

9.749

GRAVY (calculated)

-0.359

Length

448 amino acids

Sequence
(BLAST)

001: MESKGAVLMN RYELGRLLGQ GTFAKVYYAR NLKTGQSVAI KVIDKEKVVK VGLKDQIKRE ISVMKLARHP NVLQLYEVMA TKSKIYFVME YAKGGELFKK
101: VAKGKLKEEV AWKYFRQLID AVDFCHSRGV YHRDLKPENL LLDENDNLKV SDFGLSAMAE CKHQDGLLHT TCGTPTYVAP EVINKKGYDG AKADIWSCGV
201: VLFVLLAGYL PFHDSNLIEM YRKISKAEFK CPNWFSPDVR RLLQKILDPN PNTRISIAKI KESSWFRRGL KSKQIKSETG SKDMAPLDTD AASGPCKSNG
301: MASEAKQELA KPTNLNAFDI ISISAGFDLS GLFEEPCQKK KAIFTFRKPA AVIISRLEEI AKHLRLKVMK KDAGFMKFEG LKEGKKGILS IDAEIFEVTP
401: SFHLVEVKKS NGDTLEYQKL LKEDIRPALQ DIVWTWQGEE QQQQQQLS

Best Arabidopsis Sequence Match ( AT5G58380.1 )
(BLAST)

001: MENKPSVLTD KYDVGRLLGQ GTFAKVYYGR SILTNQSVAI KMIDKEKVMK VGLIEQIKRE ISVMRIARHP NVVELYEVMA TKTRIYFVME YCKGGELFNK
101: VAKGKLRDDV AWKYFYQLIN AVDFCHSREV YHRDIKPENL LLDDNENLKV SDFGLSALAD CKRQDGLLHT TCGTPAYVAP EVINRKGYDG TKADIWSCGV
201: VLFVLLAGYL PFHDSNLMEM YRKIGKADFK APSWFAPEVR RLLCKMLDPN PETRITIARI RESSWFRKGL HMKQKKMEKR VKEINSVEAG TAGTNENGAG
301: PSENGAGPSE NGDRVTEENH TDEPTNLNAF DLIALSAGFD LAGLFGDDNK RESRFTSQKP ASVIISKLEE VAQRLKLSIR KREAGLFKLE RLKEGRKGIL
401: SMDAEIFQVT PNFHLVEVKK SNGDTLEYQK LVAEDLRPAL SDIVWVWQGE KDELTSQQET EYQQQQQQEQ QEQEEPLKF

Arabidopsis Description

CIPK10CBL-interacting serine/threonine-protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C562]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.