Factsheet for VIT_04s0008g05770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_11s0016g04750.t01
VIT_19s0015g00430.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25090.1	VIT_11s0016g04750.t01	AT2G26650.1	17898163
AT2G25090.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT2G25090.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT2G25090.1	VIT_02s0236g00140.t01	AT5G47100.1	17898163
AT2G25090.1	VIT_02s0236g00150.t01	AT5G47100.1	17898163
AT2G25090.1	VIT_00s0194g00040.t01	AT5G55990.1	17898163
AT5G10930.1	VIT_19s0015g00430.t01	AT4G26630.1	25387881
AT5G10930.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT5G10930.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61670	Soybean	mitochondrion	72.93	75.12
KRH52332	Soybean	cytosol	74.05	73.07
CDX80487	Canola	cytosol	73.38	72.09
CDX97067	Canola	cytosol	66.44	72.09
CDY69661	Canola	cytosol	73.6	71.99
VIT_09s0070g00140.t01	Wine grape	cytosol	73.38	71.15
CDX69798	Canola	cytosol	68.68	70.9
AT5G10930.1	Thale cress	cytosol	70.25	70.56
Solyc08g067310.1.1	Tomato	cytosol	71.36	70.42
Bra009003.1-P	Field mustard	cytosol	68.23	70.28
PGSC0003DMT400019062	Potato	cytosol	71.14	69.74
AT5G25110.1	Thale cress	cytosol	71.81	65.78
GSMUA_Achr7P16100_001	Banana	cytosol	57.94	65.4
GSMUA_Achr9P13300_001	Banana	cytosol	57.27	64.97
GSMUA_Achr10P...	Banana	cytosol	57.72	63.7
CDY64718	Canola	cytosol	63.31	61.93
Bra032042.1-P	Field mustard	cytosol	63.09	61.17
CDY53472	Canola	cytosol	63.09	61.17
AT2G25090.1	Thale cress	cytosol	63.76	60.77
TraesCS5A01G225300.1	Wheat	cytosol	57.94	57.94
TraesCS5D01G232600.1	Wheat	cytosol	57.49	57.49
Os09t0418000-01	Rice	cytosol	58.61	57.46
VIT_11s0016g00200.t01	Wine grape	cytosol	54.59	57.28
TraesCS5B01G223900.1	Wheat	cytosol	57.27	57.27
VIT_08s0058g01040.t01	Wine grape	cytosol	58.84	56.93
VIT_06s0004g07830.t01	Wine grape	cytosol	56.38	56.25
VIT_10s0003g01410.t01	Wine grape	cytosol	58.61	56.1
Zm00001d005748_P001	Maize	cytosol	56.82	55.1
Zm00001d020496_P001	Maize	cytosol	57.05	54.96
VIT_13s0067g02480.t01	Wine grape	cytosol	56.82	54.74
EER98907	Sorghum	cytosol	58.39	54.49
VIT_09s0070g00160.t01	Wine grape	cytosol	47.87	53.77
VIT_10s0003g01420.t01	Wine grape	cytosol	53.24	50.64
VIT_06s0004g07870.t01	Wine grape	cytosol	48.99	50.23
HORVU5Hr1G065370.2	Barley	cytosol, plastid	55.03	48.81
VIT_08s0058g01090.t01	Wine grape	cytosol	47.87	46.62
GSMUA_Achr5P04480_001	Banana	cytosol, nucleus, plasma membrane	54.36	37.73

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100259329	wikigene:100259329	MapMan:18.4.5.3	Gene3D:3.30.310.80	ProteinID:CCB46822	ProteinID:CCB46822.1
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	UniProt:F6H3I7	EMBL:FN595231	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0018107	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100259329	wikigene:LOC100259329	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895
PANTHER:PTHR43895:SF18	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC57947	TIGR:TC71116	UniParc:UPI0001983120	ArrayExpress:VIT_04s0008g05770	EnsemblPlantsGene:VIT_04s0008g05770	EnsemblPlants:VIT_04s0008g05770.t01
unigene:Vvi.2301	RefSeq:XP_002285264	RefSeq:XP_002285264.1	RefSeq:XP_002285269	RefSeq:XP_002285269.1	SEG:seg

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6H3I7]

Coordinates

chr4:-:5291827..5293589

Molecular Weight (calculated)

50548.4 Da

IEP (calculated)

9.312

GRAVY (calculated)

-0.255

Length

447 amino acids

Sequence
(BLAST)

001: MEEVRSMLFG KYETGRLLGK GTFAKVYYAK HMVSGESVAI KVINKDYVKK EGMMEQIKRE ISVMRLVRHP NIVELKEVMA TKTKIFFVME YVRGGELFAK
101: VAKGKLKEDQ SRKYFQQLIS AIDFCHSRGV SHRDLKPENL LLDENEDLKV SDFGLSALPE QLRNDGLLHT QCGTPAYVAP EVLRKKGYDG AKADMWSCGV
201: ILFVLLAGFL PFQEENLMKM YRKVFKAEYQ FPPWFSSEAK RLISKLLVAD PQRRITIPAI MRVPWFRKGF SRPVAFSIEE PFPDKPEDSD TLKLEAAKST
301: NSPSPAFFNA FEFISSMSSG FDLSSLFENQ KKAGSMFTSK CSAAAIMAKI ELVAKGLKFR VAKVKDFKLK LQGQSEGRKG RLSLTAEVFE VAPEVAIVEL
401: LKSAGDTLEY AKFCEEDVRP ALKDIVWTWQ GDNHNGNVSN NIVECEN

Best Arabidopsis Sequence Match ( AT5G25110.1 )
(BLAST)

001: MGSKLKLYPL LNHSSVFHPD SRYQSAPTME EEQQQLRVLF AKYEMGRLLG KGTFGKVYYG KEITTGESVA IKIINKDQVK REGMMEQIKR EISIMRLVRH
101: PNIVELKEVM ATKTKIFFIM EYVKGGELFS KIVKGKLKED SARKYFQQLI SAVDFCHSRG VSHRDLKPEN LLVDENGDLK VSDFGLSALP EQILQDGLLH
201: TQCGTPAYVA PEVLRKKGYD GAKGDIWSCG IILYVLLAGF LPFQDENLMK MYRKIFKSEF EYPPWFSPES KRLISKLLVV DPNKRISIPA IMRTPWFRKN
301: INSPIEFKID ELEIQNVEDE TPTTTATTAT TTTTPVSPKF FNAFEFISSM SSGFDLSSLF ESKRKLRSMF TSRWSASEIM GKLEGIGKEM NMKVKRTKDF
401: KVKLFGKTEG RKGQIAVTAE VFEVAPEVAV VELCKSAGDT LEYNRLYEEH VRPALEEIVW SWHGDNHNNN IVKSNGNYVS DENSGSDC

Arabidopsis Description

CIPK25CBL-interacting serine/threonine-protein kinase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1D5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.