Factsheet for VIT_11s0016g00200.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G30960.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT4G30960.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT4G30960.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT4G30960.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592
AT4G30960.1	VIT_02s0236g00140.t01	AT5G47100.1	17898163
AT4G30960.1	VIT_02s0236g00150.t01	AT5G47100.1	17898163
AT4G30960.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129
AT4G30960.1	VIT_00s0194g00040.t01	AT5G55990.1	17898163
AT4G30960.1	VIT_00s0194g00040.t01	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23269	Canola	cytosol	73.24	78.39
PGSC0003DMT400029044	Potato	cytosol	77.46	77.83
Solyc07g005440.1.1	Tomato	cytosol	76.53	76.89
Bra010263.1-P	Field mustard	cytosol	77.93	76.85
KRH12907	Soybean	cytosol	78.87	76.71
KRH03068	Soybean	cytosol	75.82	76.54
CDY36461	Canola	cytosol	73.47	76.34
KRH72285	Soybean	cytosol	76.76	76.05
AT4G30960.1	Thale cress	cytosol	78.64	75.96
CDY13400	Canola	cytosol	72.07	75.8
CDY28231	Canola	cytosol	73.94	75.72
CDX68708	Canola	cytosol	73.94	75.72
KRH37909	Soybean	cytosol	78.17	75.68
CDX72282	Canola	cytosol	71.6	75.12
Bra011236.1-P	Field mustard	cytosol	77.7	75.06
Bra024032.1-P	Field mustard	cytosol	76.29	74.37
Solyc12g010130.1.1	Tomato	cytosol	75.35	74.31
PGSC0003DMT400020443	Potato	cytosol	74.88	73.84
VIT_09s0070g00160.t01	Wine grape	cytosol	68.78	73.62
GSMUA_AchrUn_...	Banana	cytosol	50.23	73.29
TraesCS5D01G232500.1	Wheat	cytosol	57.28	62.56
TraesCS4A01G200000.1	Wheat	cytosol	64.32	62.41
GSMUA_Achr7P26970_001	Banana	cytosol	56.34	62.34
TraesCS4B01G115400.1	Wheat	cytosol	64.08	62.19
TraesCS4D01G113100.1	Wheat	cytosol	64.08	62.19
GSMUA_Achr7P05210_001	Banana	cytosol	57.04	61.99
HORVU5Hr1G065350.1	Barley	cytosol	64.55	61.66
TraesCS5A01G225200.1	Wheat	cytosol	64.32	61.44
TraesCS5B01G223800.1	Wheat	cytosol	64.08	61.07
HORVU4Hr1G021090.1	Barley	cytosol	62.91	60.63
Zm00001d032155_P001	Maize	cytosol	63.15	60.04
Zm00001d020497_P001	Maize	cytosol	61.74	59.37
EES13913	Sorghum	cytosol	63.38	59.08
EER96738	Sorghum	cytosol	59.86	58.22
VIT_06s0004g07830.t01	Wine grape	cytosol	60.33	57.37
VIT_08s0058g01040.t01	Wine grape	cytosol	61.97	57.14
VIT_10s0003g01410.t01	Wine grape	cytosol	62.21	56.75
Zm00001d050422_P001	Maize	cytosol	60.33	54.91
VIT_04s0008g05770.t01	Wine grape	cytosol	57.28	54.59
VIT_13s0067g02480.t01	Wine grape	cytosol	59.39	54.53
VIT_10s0003g01420.t01	Wine grape	cytosol	58.45	52.98
VIT_09s0070g00140.t01	Wine grape	cytosol	57.28	52.93
GSMUA_Achr10P...	Banana	cytosol	55.4	51.75
VIT_06s0004g07870.t01	Wine grape	cytosol	50.94	49.77
VIT_08s0058g01090.t01	Wine grape	cytosol	49.53	45.97
Os09t0418500-00	Rice	extracellular	55.63	29.33

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100241657	wikigene:100241657	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	UniProt:A5C5K7
ProteinID:ACQ83519	ProteinID:ACQ83519.1	EMBL:AM483148	ProteinID:CAN68670	ProteinID:CAN68670.1	ProteinID:CCB62899
ProteinID:CCB62899.1	EntrezGene:CIPK03	wikigene:CIPK03	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	EMBL:FJ901231	EMBL:FN596790
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	RefSeq:NP_001268212.1
PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF8	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC51945	TIGR:TC58870	UniParc:UPI000152281D	ArrayExpress:VIT_11s0016g00200
EnsemblPlantsGene:VIT_11s0016g00200	EnsemblPlants:VIT_11s0016g00200.t01	unigene:Vvi.6697	SEG:seg	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5C5K7]

Coordinates

chr11_random:-:230595..232286

Molecular Weight (calculated)

47742.9 Da

IEP (calculated)

9.447

GRAVY (calculated)

-0.284

Length

426 amino acids

Sequence
(BLAST)

001: MADSGKDSCP SLLHGKYELG RLLGHGTFAK VYHARNLQTG KSVAMKVVGK DKVIKVGMTE QVKREISVMK MVQHPNIVEL HEVMASKSKI YFAMELVRGG
101: ELFSKISKGR LREDVARVYF QQLISAVDFC HSRGVYHRDL KPENLLLDES GNLKVTDFGL SALSEHLKQD GLLHTTCGTP AYVAPEVIGK NGYDGAKADL
201: WSCGVILYVL LAGFLPFQDD NIVAMYRKIY RGDFKCPPWF SPESRRLVTK LLDPTPNTRI TIAKIVESSW FKKSVPKTIL TKEEQEFESF NCGKAKQPET
301: LNAFHIISLS EGFDLSPLFE EKKREQKEEL RFATTQPASS VISKLEEVAK AGKFSVKKSE TIVRLQGQER GRKGKLAIGA EIFAVAPSFL VVEVKKHHGD
401: SLEYDQFCNK ELRPALKDIV WTSTPA

Best Arabidopsis Sequence Match ( AT4G30960.1 )
(BLAST)

001: MVGAKPVENG SDGGSSTGLL HGRYELGRLL GHGTFAKVYH ARNIQTGKSV AMKVVGKEKV VKVGMVDQIK REISVMRMVK HPNIVELHEV MASKSKIYFA
101: MELVRGGELF AKVAKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAF TEHLKQDGLL HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARRLVTKLLD PNPNTRITIE KVMDSPWFKK QATRSRNEPV AATITTTEED
301: VDFLVHKSKE ETETLNAFHI IALSEGFDLS PLFEEKKKEE KREMRFATSR PASSVISSLE EAARVGNKFD VRKSESRVRI EGKQNGRKGK LAVEAEIFAV
401: APSFVVVEVK KDHGDTLEYN NFCSTALRPA LKDIFWTSTP A

Arabidopsis Description

CIPK6CBL-interacting serine/threonine-protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:O65554]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.