Factsheet for VIT_06s0004g07870.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_02s0025g01630.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_06s0004g07870.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30360.1	VIT_06s0004g07870.t01	AT2G30360.1	17785451
AT2G30360.1	VIT_02s0025g01630.t01	AT4G01420.1	11230129
AT2G30360.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT2G30360.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT2G30360.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129
AT2G30360.1	VIT_00s0194g00040.t01	AT5G55990.1	11402167
AT2G30360.1	VIT_00s0194g00040.t01	AT5G55990.1	17483306

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24005	Canola	cytosol	65.37	67.54
Bra022794.1-P	Field mustard	cytosol	65.83	67.21
CDX84840	Canola	cytosol	65.83	67.21
KRH17163	Soybean	cytosol	67.66	67.2
CDY29680	Canola	cytosol	58.95	66.93
Bra021628.1-P	Field mustard	cytosol	58.72	66.84
KRH72812	Soybean	cytosol	67.2	66.29
CDY54010	Canola	cytosol	57.8	65.8
CDY68071	Canola	cytosol	65.14	65.44
KRG98160	Soybean	cytosol	67.43	65.33
VIT_08s0058g01090.t01	Wine grape	cytosol	68.12	64.71
Bra027311.1-P	Field mustard	cytosol	54.36	64.58
AT2G30360.1	Thale cress	cytosol, nucleus, plastid	63.99	64.14
KRH18584	Soybean	cytosol	66.74	63.82
Bra018319.1-P	Field mustard	cytosol	64.68	63.8
CDY02060	Canola	cytosol	63.99	62.98
PGSC0003DMT400078266	Potato	cytosol	59.17	61.58
Solyc06g082440.1.1	Tomato	cytosol	58.49	60.86
Solyc06g007440.2.1	Tomato	cytosol	60.78	59.55
PGSC0003DMT400052998	Potato	cytosol	60.55	59.19
GSMUA_Achr9P04780_001	Banana	cytosol	45.87	56.18
GSMUA_Achr8P01770_001	Banana	cytosol	43.58	55.39
VIT_10s0003g01420.t01	Wine grape	cytosol	57.8	53.62
VIT_09s0070g00160.t01	Wine grape	cytosol	47.25	51.76
GSMUA_Achr6P32570_001	Banana	cytosol	43.35	51.5
VIT_11s0016g00200.t01	Wine grape	cytosol	49.77	50.94
VIT_04s0008g05770.t01	Wine grape	cytosol	50.23	48.99
VIT_06s0004g07830.t01	Wine grape	cytosol	50.23	48.88
VIT_10s0003g01410.t01	Wine grape	cytosol	52.06	48.61
VIT_08s0058g01040.t01	Wine grape	cytosol	50.69	47.84
VIT_13s0067g02480.t01	Wine grape	cytosol	50.23	47.2
VIT_09s0070g00140.t01	Wine grape	cytosol	47.48	44.9

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100250106	wikigene:100250106	MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	ProteinID:ACQ83526
ProteinID:ACQ83526.1	UniProt:C4P7V9	ProteinID:CCB43410	ProteinID:CCB43410.1	EntrezGene:CIPK10	wikigene:CIPK10
InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	EMBL:FJ901238	EMBL:FN594951	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0018107	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf
InterPro:NAF/FISL_domain	InterPro:NAF_dom	RefSeq:NP_001268214.1	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF22
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC60079
UniParc:UPI00015C80BE	ArrayExpress:VIT_06s0004g07870	EnsemblPlantsGene:VIT_06s0004g07870	EnsemblPlants:VIT_06s0004g07870.t01	unigene:Vvi.7016	SEG:seg

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:C4P7V9]

Coordinates

chr6:-:8640468..8642137

Molecular Weight (calculated)

48715.7 Da

IEP (calculated)

8.521

GRAVY (calculated)

-0.261

Length

436 amino acids

Sequence
(BLAST)

001: MPEIERGSGS GAASATSSEK ALFGKYELGR LLGCGAFAKV YHARNIRTGQ SVAIKAICKK KIVGSNLMAN VKREISIMRR LQHPHIVKLY EVLATKTKIY
101: CVMEFVKGGE LFAKVAKGRF SEDLSRRYFQ QLISAVGYCH SRGVFHRDLK PENLLVDENG CLKVSDFGLS ALTDQIRLDG LLHTLCGTPA YVAPEILTKK
201: GYDGAKVDVW SCGVILFVLN AGYLPFNDPN LMAMYKKIYK GEFRCPKWMS PDLKRFLSRL LDTNPNTRIT VDEILQDPWF RKGYKEVKFH EEDFGLKSEK
301: EDRSPTNLNA FDIISFSSGL NLSGLFNDSS KSSPDDDERF VSAEPVEKII EKIEEIAEGE NLTVNWKKEW GVDLQGPNGN FIIGVQIDRL THDLVVVEVR
401: RRAGDAAAYA AAWKDKLRPA LAGLMFQGPE TQVAGD

Best Arabidopsis Sequence Match ( AT2G30360.1 )
(BLAST)

001: MPEIEIAAGS GDNNDALFGK YELGKLLGCG AFAKVFHARD RRTGQSVAVK ILNKKKLLTN PALANNIKRE ISIMRRLSHP NIVKLHEVMA TKSKIFFAME
101: FVKGGELFNK ISKHGRLSED LSRRYFQQLI SAVGYCHARG VYHRDLKPEN LLIDENGNLK VSDFGLSALT DQIRPDGLLH TLCGTPAYVA PEILSKKGYE
201: GAKVDVWSCG IVLFVLVAGY LPFNDPNVMN MYKKIYKGEY RFPRWMSPDL KRFVSRLLDI NPETRITIDE ILKDPWFVRG GFKQIKFHDD EIEDQKVESS
301: LEAVKSLNAF DLISYSSGLD LSGLFAGCSN SSGESERFLS EKSPEMLAEE VEGFAREENL RMKKKKEEEY GFEMEGQNGK FGIGICISRL NDLLVVVEAR
401: RRGGDGDCYK EMWNGKLRVQ LIRVCDQTSS TNAAI

Arabidopsis Description

CIPK11CBL-interacting serine/threonine-protein kinase 11 [Source:UniProtKB/Swiss-Prot;Acc:O22932]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.