Factsheet for VIT_10s0003g01420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0194g00040.t01
VIT_00s0199g00140.t01
VIT_02s0236g00140.t01
VIT_02s0236g00150.t01
VIT_14s0006g03230.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18700.1	VIT_00s0199g00140.t01	AT1G78300.1	21798944
AT4G18700.1	VIT_14s0006g03230.t01	AT5G38480.1	21798944
AT4G18700.1	VIT_02s0236g00140.t01	AT5G47100.1	14730064
AT4G18700.1	VIT_02s0236g00150.t01	AT5G47100.1	14730064
AT4G18700.1	VIT_00s0194g00040.t01	AT5G55990.1	11230129
AT4G18700.1	VIT_00s0194g00040.t01	AT5G55990.1	14730130
AT4G18700.1	VIT_00s0194g00040.t01	AT5G55990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69878	Canola	cytosol	74.47	81.21
CDX78885	Canola	cytosol	79.15	79.66
CDX99438	Canola	cytosol	78.72	79.06
AT4G18700.1	Thale cress	cytosol	82.13	78.94
Solyc02g072530.1.1	Tomato	cytosol	80.0	78.66
PGSC0003DMT400073132	Potato	cytosol	79.57	78.24
Bra020996.1-P	Field mustard	cytosol	80.43	77.46
Bra013340.1-P	Field mustard	cytosol	81.28	77.33
CDY67623	Canola	cytosol	73.4	76.16
CDY70469	Canola	cytosol	76.6	75.0
AT5G45810.1	Thale cress	cytosol	77.02	74.95
Bra025052.1-P	Field mustard	cytosol	76.38	74.64
KRH11038	Soybean	cytosol	80.85	74.51
KRH21248	Soybean	cytosol	80.43	73.83
GSMUA_Achr6P14530_001	Banana	cytosol, mitochondrion	62.55	73.32
KRH58970	Soybean	cytosol	77.02	70.02
KRH42869	Soybean	cytosol	77.87	69.32
HORVU6Hr1G054210.3	Barley	cytosol	63.62	68.26
Zm00001d038690_P001	Maize	cytosol	68.72	64.21
CDY34052	Canola	cytosol	68.72	63.83
Os05t0514200-01	Rice	cytosol, plastid	68.94	63.78
OQU78296	Sorghum	plastid	68.51	63.64
HORVU1Hr1G076910.3	Barley	cytosol, plastid	67.87	62.55
Zm00001d010743_P001	Maize	cytosol, plastid	67.66	62.48
TraesCS3A01G305900.1	Wheat	plastid	68.94	62.07
TraesCS1B01G347100.1	Wheat	plastid	68.09	61.66
TraesCS3B01G330600.1	Wheat	plastid	68.72	61.52
TraesCS1A01G333800.1	Wheat	plastid	68.09	61.42
EES03646	Sorghum	plastid	67.66	61.27
VIT_11s0016g00200.t01	Wine grape	cytosol	52.98	58.45
TraesCS3D01G296000.1	Wheat	plastid	43.83	58.36
Zm00001d012696_P001	Maize	plastid	64.04	58.22
VIT_06s0004g07870.t01	Wine grape	cytosol	53.62	57.8
Os01t0759400-02	Rice	cytosol, plastid	66.38	57.78
VIT_10s0003g01410.t01	Wine grape	cytosol	57.23	57.6
VIT_09s0070g00160.t01	Wine grape	cytosol	48.51	57.29
EES02274	Sorghum	cytosol	62.55	57.2
VIT_06s0004g07830.t01	Wine grape	cytosol	54.47	57.14
Zm00001d043389_P003	Maize	cytosol, plastid	66.6	57.12
VIT_08s0058g01040.t01	Wine grape	cytosol	55.96	56.93
Os01t0206300-00	Rice	cytosol	61.28	56.36
HORVU3Hr1G025810.1	Barley	cytosol	61.06	56.16
HORVU3Hr1G073100.2	Barley	cytosol	68.72	56.08
TraesCS3B01G153800.1	Wheat	mitochondrion	61.49	55.68
TraesCS3D01G136700.1	Wheat	mitochondrion	61.28	55.38
Zm00001d008899_P001	Maize	cytosol	60.21	54.95
TraesCS3A01G135700.1	Wheat	mitochondrion	60.64	54.6
VIT_13s0067g02480.t01	Wine grape	cytosol	53.4	54.09
VIT_04s0008g05770.t01	Wine grape	cytosol	50.64	53.24
VIT_08s0058g01090.t01	Wine grape	cytosol	51.91	53.16
VIT_09s0070g00140.t01	Wine grape	cytosol	47.87	48.81

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100263473	wikigene:100263473	MapMan:18.4.5.3	Gene3D:3.30.310.80	ProteinID:ACQ83517	ProteinID:ACQ83517.1
EMBL:AM462632	ProteinID:CAN63583	ProteinID:CAN63583.1	ProteinID:CCB55693	ProteinID:CCB55693.1	EntrezGene:CIPK01
wikigene:CIPK01	InterPro:Ca/CaM-dep_Ca-dep_prot_Kinase	UniProt:F6HMA5	EMBL:FJ901229	EMBL:FN595992	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451	InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom
PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50816	PANTHER:PTHR43895	PANTHER:PTHR43895:SF19	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002107FC0	ArrayExpress:VIT_10s0003g01420	EnsemblPlantsGene:VIT_10s0003g01420
EnsemblPlants:VIT_10s0003g01420.t01	unigene:Vvi.3878	SEG:seg	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HMA5]

Coordinates

chr10:-:2803530..2807093

Molecular Weight (calculated)

52969.8 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.305

Length

470 amino acids

Sequence
(BLAST)

001: MADRQSKENT SKRKNGENQS LLLGRYEIGK LLGHGTFAKV YHARNVGSNE SVAIKVIDKE KILKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVGFCH ARGVYHRDLK PENLLLDEAG DLKVSDFGLS AVSDQMRQDG LFHTFCGTPA YVAPEVLARK
201: GYDASKVDIW SCGVILFVLM AGYLPFHDQN IMAMYKKIYK GEFRCPRWFS PELARLLTRL LDTNPETRIT IPEIMENRWF KKGFKHIKFY IEDDTLRLCN
301: AEEAEDDVES LSDQSMSESE SELETRRRLS TLPRPASLNA FDIISFSPGF DLSGLFEEGG GDARFVSGAP VSKIISKLEE IAKVVSFTVR KKDCRVSLEG
401: SREGVKGPLT IAAEIFELTP SLVVVEVKKK GGDKGEYEEF CNRELKPVLQ NLNLVVDDSA STPHLPSDTE

Best Arabidopsis Sequence Match ( AT4G18700.1 )
(BLAST)

001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE

Arabidopsis Description

CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.