Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH11038 | Soybean | cytosol | 95.9 | 96.27 |
VIT_10s0003g01420.t01 | Wine grape | cytosol | 73.83 | 80.43 |
CDY69878 | Canola | cytosol | 66.41 | 78.89 |
CDX78885 | Canola | cytosol | 70.31 | 77.09 |
CDX99438 | Canola | cytosol | 69.92 | 76.5 |
Bra020996.1-P | Field mustard | cytosol | 72.46 | 76.02 |
Bra013340.1-P | Field mustard | cytosol | 72.66 | 75.3 |
AT4G18700.1 | Thale cress | cytosol | 71.88 | 75.26 |
Solyc02g072530.1.1 | Tomato | cytosol | 69.73 | 74.69 |
CDY67623 | Canola | cytosol | 66.02 | 74.61 |
PGSC0003DMT400073132 | Potato | cytosol | 69.53 | 74.48 |
KRH58970 | Soybean | cytosol | 75.0 | 74.27 |
AT5G45810.1 | Thale cress | cytosol | 68.95 | 73.08 |
Bra025052.1-P | Field mustard | cytosol | 68.55 | 72.97 |
CDY70469 | Canola | cytosol | 68.36 | 72.92 |
KRH42869 | Soybean | cytosol | 75.0 | 72.73 |
GSMUA_Achr6P14530_001 | Banana | cytosol, mitochondrion | 54.88 | 70.07 |
HORVU6Hr1G054210.3 | Barley | cytosol | 58.4 | 68.26 |
Zm00001d038690_P001 | Maize | cytosol | 65.04 | 66.2 |
OQU78296 | Sorghum | plastid | 64.65 | 65.42 |
Zm00001d010743_P001 | Maize | cytosol, plastid | 64.06 | 64.44 |
Os05t0514200-01 | Rice | cytosol, plastid | 63.48 | 63.98 |
HORVU1Hr1G076910.3 | Barley | cytosol, plastid | 62.89 | 63.14 |
EES03646 | Sorghum | plastid | 63.09 | 62.24 |
TraesCS1B01G347100.1 | Wheat | plastid | 62.7 | 61.85 |
TraesCS3A01G305900.1 | Wheat | plastid | 62.89 | 61.69 |
TraesCS1A01G333800.1 | Wheat | plastid | 62.7 | 61.61 |
TraesCS3B01G330600.1 | Wheat | plastid | 62.3 | 60.76 |
CDY34052 | Canola | cytosol | 59.77 | 60.47 |
Zm00001d012696_P001 | Maize | plastid | 59.77 | 59.19 |
Zm00001d043389_P003 | Maize | cytosol, plastid | 62.3 | 58.21 |
TraesCS3D01G296000.1 | Wheat | plastid | 39.65 | 57.51 |
KRH03068 | Soybean | cytosol | 47.27 | 57.35 |
Os01t0759400-02 | Rice | cytosol, plastid | 60.16 | 57.04 |
HORVU3Hr1G025810.1 | Barley | cytosol | 56.64 | 56.75 |
EES02274 | Sorghum | cytosol | 56.84 | 56.61 |
KRH72285 | Soybean | cytosol | 47.27 | 56.28 |
TraesCS3B01G153800.1 | Wheat | mitochondrion | 57.03 | 56.26 |
Os01t0206300-00 | Rice | cytosol | 55.86 | 55.97 |
TraesCS3D01G136700.1 | Wheat | mitochondrion | 56.84 | 55.96 |
HORVU3Hr1G073100.2 | Barley | cytosol | 62.89 | 55.9 |
TraesCS3A01G135700.1 | Wheat | mitochondrion | 56.45 | 55.36 |
KRH12907 | Soybean | cytosol | 47.27 | 55.25 |
Zm00001d008899_P001 | Maize | cytosol | 55.27 | 54.95 |
KRH37909 | Soybean | cytosol | 46.68 | 54.32 |
KRH76102 | Soybean | cytosol | 49.41 | 54.18 |
KRH40770 | Soybean | cytosol | 48.44 | 53.91 |
KRH00415 | Soybean | cytosol | 48.44 | 53.68 |
KRG98172 | Soybean | cytosol | 48.24 | 53.46 |
KRH17163 | Soybean | cytosol | 45.7 | 53.3 |
KRG97651 | Soybean | cytosol | 46.48 | 53.01 |
KRH72812 | Soybean | cytosol | 45.7 | 52.94 |
KRH21249 | Soybean | cytosol | 46.29 | 52.55 |
KRH72808 | Soybean | cytosol | 47.46 | 52.48 |
KRH30131 | Soybean | cytosol | 47.07 | 52.16 |
KRG98160 | Soybean | cytosol | 45.7 | 52.0 |
KRH65452 | Soybean | cytosol | 41.8 | 51.82 |
KRH31221 | Soybean | cytosol | 45.7 | 51.77 |
KRG94820 | Soybean | cytosol | 43.16 | 51.4 |
KRH40763 | Soybean | cytosol | 43.75 | 51.14 |
KRH18584 | Soybean | cytosol | 45.31 | 50.88 |
KRH00424 | Soybean | cytosol | 43.55 | 50.34 |
KRH47346 | Soybean | cytosol | 43.16 | 50.11 |
KRH61670 | Soybean | mitochondrion | 42.19 | 49.77 |
KRH44558 | Soybean | cytosol | 41.6 | 49.53 |
KRH52332 | Soybean | cytosol | 43.55 | 49.23 |
KRH09653 | Soybean | cytosol | 43.36 | 48.16 |
KRH23642 | Soybean | cytosol, nucleus, plastid | 37.3 | 44.94 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr13:+:34069476..34071724
Molecular Weight (calculated)
57534.3 Da
IEP (calculated)
7.131
GRAVY (calculated)
-0.242
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVVSKSPT PTSNLISPNK KETSNLLLGR FEIGKLLGHG TFAKVYYARN IKTGEGVAIK VIDKEKILKG GLVAHIKREI SILRRVRHPN IVQLFEVMAT
101: KSKIYFVMEY VRGGELFNKV AKGRLKEEVA RKYFQQLISA VGFCHARGVY HRDLKPENLL LDENGNLKVS DFGLSAVSDQ IRQDGLFHTF CGTPAYVAPE
201: VLARKGYDGA KVDLWSCGVV LFVLMAGYLP FHDQNVMAMY KKIYRGEFRC PRWFSPDLSR LLTRLLDTKP ETRIAIPEIM ENKWFKKGFK QIKFYVEDDR
301: LCNVVDDDGL MDNDDDTASI VSVASFSDYS VSESDSEIET RRRINAPLPR PPSLNAFDII SFSPGFNLSG LFEEKEDETR FVTAAPVNRI ISKLEEIAQL
401: VRFSVRKKDC RVSLEGTREG VRGPLTIAAE IFELTPSLVV VEVKKKGGDR AEYERFCNDE LKPGLQNLMV EESATSSELS TPIQPSLLRG LSEPVPDISS
501: DIETPLCIPS DD
101: KSKIYFVMEY VRGGELFNKV AKGRLKEEVA RKYFQQLISA VGFCHARGVY HRDLKPENLL LDENGNLKVS DFGLSAVSDQ IRQDGLFHTF CGTPAYVAPE
201: VLARKGYDGA KVDLWSCGVV LFVLMAGYLP FHDQNVMAMY KKIYRGEFRC PRWFSPDLSR LLTRLLDTKP ETRIAIPEIM ENKWFKKGFK QIKFYVEDDR
301: LCNVVDDDGL MDNDDDTASI VSVASFSDYS VSESDSEIET RRRINAPLPR PPSLNAFDII SFSPGFNLSG LFEEKEDETR FVTAAPVNRI ISKLEEIAQL
401: VRFSVRKKDC RVSLEGTREG VRGPLTIAAE IFELTPSLVV VEVKKKGGDR AEYERFCNDE LKPGLQNLMV EESATSSELS TPIQPSLLRG LSEPVPDISS
501: DIETPLCIPS DD
001: MAEKITRETS LPKERSSPQA LILGRYEMGK LLGHGTFAKV YLARNVKTNE SVAIKVIDKE KVLKGGLIAH IKREISILRR VRHPNIVQLF EVMATKAKIY
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
101: FVMEYVRGGE LFNKVAKGRL KEEVARKYFQ QLISAVTFCH ARGVYHRDLK PENLLLDENG NLKVSDFGLS AVSDQIRQDG LFHTFCGTPA YVAPEVLARK
201: GYDAAKVDIW SCGVILFVLM AGYLPFHDRN VMAMYKKIYR GEFRCPRWFS TELTRLLSKL LETNPEKRFT FPEIMENSWF KKGFKHIKFY VEDDKLCNVV
301: DDDELESDSV ESDRDSAASE SEIEYLEPRR RVGGLPRPAS LNAFDIISFS QGFDLSGLFD DDGEGSRFVS GAPVSKIISK LEEIAKVVSF TVRKKDCRVS
401: LEGSRQGVKG PLTIAAEIFE LTPSLVVVEV KKKGGDKTEY EDFCNNELKP KLQNLTADDV VAEPVAVSAV DETAIPNSPT ISFLPSDTE
Arabidopsis Description
CIPK12CBL-interacting serine/threonine-protein kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN43]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.