Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013429_P001 | Maize | extracellular | 31.45 | 43.1 |
| KRH72385 | Soybean | endoplasmic reticulum, nucleus | 67.3 | 40.84 |
| KRH53025 | Soybean | cytosol | 65.41 | 37.28 |
| PGSC0003DMT400041810 | Potato | cytosol | 60.38 | 37.21 |
| Bra003649.1-P | Field mustard | cytosol | 59.75 | 36.54 |
| CDX68022 | Canola | cytosol | 59.75 | 36.54 |
| CDX79255 | Canola | cytosol | 59.75 | 36.54 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 58.49 | 36.47 |
| PGSC0003DMT400060654 | Potato | cytosol | 58.49 | 36.47 |
| KRH62315 | Soybean | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 65.41 | 36.11 |
| Solyc11g010200.1.1 | Tomato | nucleus | 61.01 | 36.06 |
| CDX73313 | Canola | cytosol | 59.75 | 35.85 |
| Bra035027.1-P | Field mustard | cytosol | 58.49 | 35.77 |
| CDX88436 | Canola | cytosol | 58.49 | 35.77 |
| KRH46909 | Soybean | cytosol | 58.49 | 35.77 |
| AT1G78300.1 | Thale cress | cytosol | 57.86 | 35.52 |
| KRH01783 | Soybean | nucleus | 57.23 | 35.41 |
| CDY12024 | Canola | cytosol | 57.86 | 35.25 |
| Bra028068.1-P | Field mustard | cytosol | 57.86 | 35.25 |
| CDY28408 | Canola | cytosol | 57.86 | 34.98 |
| Bra034430.1-P | Field mustard | cytosol | 57.86 | 34.98 |
| CDY14618 | Canola | cytosol | 56.6 | 34.62 |
| KRH16772 | Soybean | cytosol | 67.92 | 34.39 |
| Bra008355.1-P | Field mustard | cytosol | 53.46 | 34.0 |
| CDY41483 | Canola | cytosol | 54.72 | 33.59 |
| Bra016380.1-P | Field mustard | cytosol | 54.72 | 33.59 |
| KRH62193 | Soybean | endoplasmic reticulum | 52.2 | 33.2 |
| KRH52909 | Soybean | endoplasmic reticulum | 51.57 | 32.8 |
| AT1G35160.2 | Thale cress | cytosol | 60.38 | 32.54 |
| CDX91676 | Canola | cytosol | 52.83 | 32.43 |
| CDY46646 | Canola | cytosol | 52.83 | 32.31 |
| Bra012325.1-P | Field mustard | cytosol | 52.83 | 31.94 |
| CDY00447 | Canola | cytosol | 51.57 | 31.54 |
| CDX87455 | Canola | cytosol | 59.12 | 31.44 |
| AT4G09000.2 | Thale cress | cytosol | 60.38 | 30.19 |
| KRH50527 | Soybean | cytosol | 49.06 | 30.12 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 33.33 | 30.11 |
| KRG89486 | Soybean | cytosol | 49.06 | 30.0 |
| KRH75027 | Soybean | endoplasmic reticulum | 46.54 | 28.57 |
| KRH70879 | Soybean | endoplasmic reticulum | 45.91 | 28.19 |
| KRH27042 | Soybean | nucleus | 45.28 | 27.59 |
| KRH22287 | Soybean | nucleus, plasma membrane | 44.65 | 27.2 |
| KRH58958 | Soybean | endoplasmic reticulum | 44.03 | 27.03 |
| KRH42856 | Soybean | nucleus | 44.03 | 27.03 |
| KRH21981 | Soybean | cytosol | 44.03 | 26.62 |
| KRH27339 | Soybean | cytosol | 44.03 | 26.42 |
| KRG89721 | Soybean | cytosol | 10.69 | 24.29 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 57.86 | 15.83 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 | UniProt:A0A0R0FS69 |
| EMBL:ACUP02010675 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G208100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0019904 | InterPro:IPR036815 | EnsemblPlants:KRH05108 | ProteinID:KRH05108 | ProteinID:KRH05108.1 | PFAM:PF00244 |
| PANTHER:PTHR18860 | PANTHER:PTHR18860:SF26 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI0006ED5005 | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:-:34108328..34108849
Molecular Weight (calculated)
18688.6 Da
IEP (calculated)
5.688
GRAVY (calculated)
-0.116
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAPTPCEE FVYMAKLVEQ VKHYEEMVEF MEKVFASTES EELTVDERNL LSVAYKNMIG KEDHLVVIRN YRSKIKVELS NIYDKILKLL DTHLVPSLTS
101: GDSKVFYLKM KGAYHRYFTE FKIDANRKEA VESPLSTYKA AQICFFFFSF DFLDFYFVM
101: GDSKVFYLKM KGAYHRYFTE FKIDANRKEA VESPLSTYKA AQICFFFFSF DFLDFYFVM
001: MAAPPASSSA REEFVYLAKL AEQAERYEEM VEFMEKVAEA VDKDELTVEE RNLLSVAYKN VIGARRASWR IISSIEQKEE SRGNDDHVTT IRDYRSKIES
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
101: ELSKICDGIL KLLDTRLVPA SANGDSKVFY LKMKGDYHRY LAEFKTGQER KDAAEHTLTA YKAAQDIANA ELAPTHPIRL GLALNFSVFY YEILNSPDRA
201: CNLAKQAFDE AIAELDTLGE ESYKDSTLIM QLLRDNLTLW TSDMQDESPE EIKEAAAPKP AEEQKEI
Arabidopsis Description
GF14 PHIGF14 protein phi chain [Source:UniProtKB/TrEMBL;Acc:F4HWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.