CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97599
KRH31274
KRH43221
KRH59387

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	KRG97599	AT2G22240.1	21798944
AT4G39800.1	KRH31274	AT2G22240.1	21798944
AT4G39800.1	KRH43221	AT2G22240.1	21798944
AT4G39800.1	KRH59387	AT2G22240.1	21798944
AT4G39800.1	KRG97599	AT4G39800.1	21798944
AT4G39800.1	KRH31274	AT4G39800.1	21798944
AT4G39800.1	KRH43221	AT4G39800.1	21798944
AT4G39800.1	KRH59387	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59387	Soybean	cytosol	89.92	92.75
KRG97599	Soybean	cytosol	86.5	89.22
KRH31274	Soybean	cytosol	86.31	89.02
CDY68048	Canola	cytosol	76.24	88.91
VIT_07s0031g00920.t01	Wine grape	cytosol	84.22	86.86
PGSC0003DMT400071770	Potato	cytosol	84.03	86.67
Solyc04g054740.2.1	Tomato	cytosol	83.46	86.08
Solyc05g051850.2.1	Tomato	cytosol	83.08	85.69
PGSC0003DMT400056192	Potato	cytosol	82.13	84.71
Bra011830.1-P	Field mustard	cytosol	81.56	84.12
Bra038538.1-P	Field mustard	cytosol	81.37	83.92
CDX69385	Canola	cytosol	81.37	83.92
CDX76938	Canola	cytosol	81.37	83.92
CDY13774	Canola	cytosol	81.37	83.92
AT5G10170.1	Thale cress	cytosol	80.8	83.33
KXG39973	Sorghum	cytosol	80.61	83.14
CDY40084	Canola	cytosol	80.61	83.14
TraesCS4B01G267200.1	Wheat	cytosol	80.42	82.94
CDY25580	Canola	cytosol	80.42	82.94
CDX85773	Canola	cytosol	80.42	82.94
TraesCS4D01G266700.1	Wheat	cytosol	80.42	82.94
Bra030253.1-P	Field mustard	cytosol	80.42	82.94
Bra028596.1-P	Field mustard	cytosol	80.42	82.94
AT2G22240.1	Thale cress	cytosol	80.23	82.75
CDX89446	Canola	cytosol	80.04	82.55
AT4G39800.1	Thale cress	cytosol	79.85	82.19
Os03t0192700-01	Rice	cytosol	79.66	82.16
GSMUA_AchrUn_...	Banana	cytosol	79.47	81.96
GSMUA_Achr1P21570_001	Banana	cytosol	79.28	81.76
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.15	81.54
Solyc04g050820.1.1	Tomato	cytosol	45.82	81.42
Zm00001d028180_P002	Maize	cytosol	80.04	80.96
HORVU4Hr1G071730.1	Barley	cytosol	79.66	80.73
TraesCS4A01G038500.2	Wheat	cytosol	80.23	80.69
Zm00001d048201_P002	Maize	cytosol	79.47	80.38
Os10t0369900-01	Rice	plastid	75.1	77.6
Zm00001d014292_P001	Maize	cytosol	75.1	77.45
OQU91879	Sorghum	cytosol	74.14	76.47
Zm00001d030506_P001	Maize	cytosol	74.9	76.36
Zm00001d037652_P001	Maize	cytosol	30.04	76.33
CDX96980	Canola	cytosol	35.55	76.33
Bra009054.1-P	Field mustard	cytosol	26.43	75.54
Solyc04g050810.1.1	Tomato	cytosol	30.99	74.77
CDX69858	Canola	cytosol	37.64	74.72
GSMUA_AchrUn_...	Banana	cytosol	80.8	69.67
Zm00001d036866_P001	Maize	cytosol	29.47	67.39
Solyc04g050860.1.1	Tomato	cytosol	32.7	66.41
Zm00001d045455_P001	Maize	cytosol	48.67	65.64
Zm00001d023601_P002	Maize	golgi, plasma membrane	35.55	65.61

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	EntrezGene:100819908	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720
EMBL:ACUP02004851	EnsemblPlantsGene:GLYMA_08G138200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004512	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	UniProt:I1KT48
EnsemblPlants:KRH43221	ProteinID:KRH43221	ProteinID:KRH43221.1	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	MetaCyc:PWY-2301
MetaCyc:PWY-4661	MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664	SUPFAM:SSF51735	SUPFAM:SSF55347
UniParc:UPI00023C5DEF	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:10591589..10596125

Molecular Weight (calculated)

58905.6 Da

IEP (calculated)

5.990

GRAVY (calculated)

-0.156

Length

526 amino acids

Sequence
(BLAST)

001: MFIESFKVES PNVKYTETEI QSVYNYETTE LVHENNNGTY QWVVKPKTVK YEFKTNTHVP KLGVMLVGWG GNNGSTLTGG VIANREGISW ATKDKIQQAN
101: YFGSLTQASA IRVGSFQGEE IYAPFKSLLP MVNPDDVVFG GWDISNLNLA DAMARAKVFD IDLQKQLRPY MESMVPLPGI YDPDFIAANQ GDRATNVIRG
201: TKKEQVQQII KDIKEFKEST KVDKVVVLWT ANTERYSNVV VGLNDTMENL FASLDRNEAE ISPSTLYAIA CVMENVPFIN GSPQNTFVPG LIDLAIKRNS
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVNSN AILYEPGEHP DHVVVIKYVP YVGDSKRAMD
401: EYSSEIFMGG KNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIEFKAENE GKFHSFHPVA TILSYLTKAP LVSIMYLIHN CSVNFFIPPL INFLKLCEQQ
501: LLNYRFHRVR QWLMHCQSSE LCWKTS

Best Arabidopsis Sequence Match ( AT5G10170.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK

Arabidopsis Description

IPS3Probable inositol 3-phosphate synthase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.