CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG39973
OQU91879

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	KXG39973	AT2G22240.1	21798944
AT4G39800.1	OQU91879	AT2G22240.1	21798944
AT4G39800.1	KXG39973	AT4G39800.1	21798944
AT4G39800.1	OQU91879	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028180_P002	Maize	cytosol	98.82	96.92
TraesCS4D01G266700.1	Wheat	cytosol	96.08	96.08
Os03t0192700-01	Rice	cytosol	96.08	96.08
TraesCS4B01G267200.1	Wheat	cytosol	95.88	95.88
TraesCS4A01G038500.2	Wheat	cytosol	95.88	93.5
Solyc04g050820.1.1	Tomato	cytosol	52.35	90.2
VIT_07s0031g00920.t01	Wine grape	cytosol	90.2	90.2
PGSC0003DMT400071770	Potato	cytosol	89.8	89.8
Solyc05g051850.2.1	Tomato	cytosol	89.41	89.41
KRH59387	Soybean	cytosol	89.22	89.22
Solyc04g054740.2.1	Tomato	cytosol	89.22	89.22
PGSC0003DMT400056192	Potato	cytosol	89.02	89.02
Bra038538.1-P	Field mustard	cytosol	89.02	89.02
CDY13774	Canola	cytosol	89.02	89.02
CDX76938	Canola	cytosol	88.82	88.82
KRG97599	Soybean	cytosol	88.82	88.82
CDX69385	Canola	cytosol	88.63	88.63
Bra011830.1-P	Field mustard	cytosol	88.43	88.43
KRH31274	Soybean	cytosol	88.04	88.04
AT2G22240.1	Thale cress	cytosol	88.04	88.04
HORVU4Hr1G071730.1	Barley	cytosol	89.41	87.86
CDY25580	Canola	cytosol	87.84	87.84
Bra030253.1-P	Field mustard	cytosol	87.84	87.84
CDX89446	Canola	cytosol	87.65	87.65
CDY68048	Canola	cytosol	77.25	87.36
GSMUA_Achr1P21570_001	Banana	cytosol	87.06	87.06
CDY40084	Canola	cytosol	87.06	87.06
Bra009054.1-P	Field mustard	cytosol	31.37	86.96
Bra028596.1-P	Field mustard	cytosol	86.86	86.86
AT5G10170.1	Thale cress	cytosol	86.86	86.86
CDX85773	Canola	cytosol	86.67	86.67
AT4G39800.1	Thale cress	cytosol	86.67	86.5
GSMUA_AchrUn_...	Banana	cytosol	86.27	86.27
OQU91879	Sorghum	cytosol	85.49	85.49
KRH43221	Soybean	cytosol	83.14	80.61
CDX69858	Canola	cytosol	41.57	80.0
GSMUA_AchrUn_...	Banana	cytosol	88.24	73.77
CDX96980	Canola	cytosol	34.71	72.24
Solyc04g050810.1.1	Tomato	cytosol	29.41	68.81
Solyc04g050860.1.1	Tomato	cytosol	32.75	64.48

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	UniProt:A0A1B6QPZ9
GO:GO:0003674	GO:GO:0003824	GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	EnsemblPlants:KXG39973
ProteinID:KXG39973	ProteinID:KXG39973.1	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658
PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	MetaCyc:PWY-2301	MetaCyc:PWY-4661
MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664	EnsemblPlantsGene:SORBI_3001G472800	SUPFAM:SSF51735	SUPFAM:SSF55347
UniParc:UPI0002207063	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:74514163..74518940

Molecular Weight (calculated)

56234.5 Da

IEP (calculated)

5.533

GRAVY (calculated)

-0.181

Length

510 amino acids

Sequence
(BLAST)

001: MFIESFRVES PHVRYGPTEI ESEYRYDTTE LVHEGKDGAS RWVVRPKSVK YNFRTSTAVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKDKVQQAN
101: YFGSLTQAST IRVGSYNGEE IYAPFKSLLP MVNPDDLVFG GWDISNMNLA DSMTRAKVLD IDLQKQLRPY MESMVPLPGI YDPDFIAANQ GSRANNVIKG
201: TKKEQVEQII KDIREFKEKN KVDKIVVLWT ANTERYSNVC TGLNDTMENL LASVDKNEAE ISPSTLYAIA CVMEGVPFIN GSPQNTFVPG LIDLAIKNNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVSSN AILYEPGEHP DHVVVIKYVP YVGDSKRAMD
401: EYTSEIFMGG KNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQLKAEGE DKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALAKQRAMLE NIMRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.