Factsheet for TraesCS4D01G266700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G134900.1
TraesCS4A01G038500.2
TraesCS4B01G267200.1
TraesCS4D01G266700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	TraesCS1A01G134900.1	AT2G22240.1	21798944
AT4G39800.1	TraesCS4A01G038500.2	AT2G22240.1	21798944
AT4G39800.1	TraesCS4B01G267200.1	AT2G22240.1	21798944
AT4G39800.1	TraesCS4D01G266700.1	AT2G22240.1	21798944
AT4G39800.1	TraesCS1A01G134900.1	AT4G39800.1	21798944
AT4G39800.1	TraesCS4A01G038500.2	AT4G39800.1	21798944
AT4G39800.1	TraesCS4B01G267200.1	AT4G39800.1	21798944
AT4G39800.1	TraesCS4D01G266700.1	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G267200.1	Wheat	cytosol	99.61	99.61
TraesCS4A01G038500.2	Wheat	cytosol	99.61	97.13
Os03t0192700-01	Rice	cytosol	96.08	96.08
KXG39973	Sorghum	cytosol	96.08	96.08
Zm00001d048201_P002	Maize	cytosol	95.69	93.85
Zm00001d037652_P001	Maize	cytosol	38.04	93.72
Zm00001d028180_P002	Maize	cytosol	95.29	93.46
HORVU4Hr1G071730.1	Barley	cytosol	92.94	91.33
Solyc04g050820.1.1	Tomato	cytosol	52.55	90.54
VIT_07s0031g00920.t01	Wine grape	cytosol	90.2	90.2
PGSC0003DMT400071770	Potato	cytosol	89.61	89.61
Solyc05g051850.2.1	Tomato	cytosol	89.22	89.22
KRG97599	Soybean	cytosol	89.02	89.02
Solyc04g054740.2.1	Tomato	cytosol	89.02	89.02
CDX69385	Canola	cytosol	89.02	89.02
CDY13774	Canola	cytosol	88.82	88.82
Bra011830.1-P	Field mustard	cytosol	88.82	88.82
Bra038538.1-P	Field mustard	cytosol	88.82	88.82
PGSC0003DMT400056192	Potato	cytosol	88.82	88.82
KRH59387	Soybean	cytosol	88.82	88.82
CDX76938	Canola	cytosol	88.63	88.63
KRH31274	Soybean	cytosol	88.24	88.24
CDY25580	Canola	cytosol	88.04	88.04
Bra030253.1-P	Field mustard	cytosol	88.04	88.04
AT2G22240.1	Thale cress	cytosol	87.84	87.84
CDY68048	Canola	cytosol	77.65	87.8
GSMUA_Achr1P21570_001	Banana	cytosol	87.45	87.45
CDX89446	Canola	cytosol	87.45	87.45
CDY40084	Canola	cytosol	87.06	87.06
Bra009054.1-P	Field mustard	cytosol	31.37	86.96
AT4G39800.1	Thale cress	cytosol	87.06	86.89
AT5G10170.1	Thale cress	cytosol	86.86	86.86
Bra028596.1-P	Field mustard	cytosol	86.67	86.67
GSMUA_AchrUn_...	Banana	cytosol	86.67	86.67
CDX85773	Canola	cytosol	86.67	86.67
Zm00001d036866_P001	Maize	cytosol	36.47	80.87
KRH43221	Soybean	cytosol	82.94	80.42
CDX69858	Canola	cytosol	41.37	79.62
Zm00001d023601_P002	Maize	golgi, plasma membrane	43.73	78.25
Zm00001d045455_P001	Maize	cytosol	58.04	75.9
GSMUA_AchrUn_...	Banana	cytosol	88.43	73.93
CDX96980	Canola	cytosol	34.71	72.24
Solyc04g050810.1.1	Tomato	cytosol	29.02	67.89
Solyc04g050860.1.1	Tomato	cytosol	32.55	64.09

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13
SUPFAM:SSF51735	SUPFAM:SSF55347	EnsemblPlantsGene:TraesCS4D01G266700	EnsemblPlants:TraesCS4D01G266700.1	:	:

Description

No Description!

Coordinates

chr4D:-:437515055..437519023

Molecular Weight (calculated)

56145.4 Da

IEP (calculated)

5.361

GRAVY (calculated)

-0.161

Length

510 amino acids

Sequence
(BLAST)

001: MFIESFRVES PNVRYGAGEI ESEYRYDTTE LVHESHDGAS KWVVRPKSVN YHFKTNTNVP KLGVMLVGWG GNNGSTLMAG VIANREGISW ATKDKVQQAN
101: YFGSLTQAST IRVGSYNGEE IYAPFKSLLP MVNPDDLVFG GWDISSMNLA DAMTRAKVLD IDLQKQLRPY MESIVPLPGI YDPDFIAANQ GSRANNVIKG
201: TKKEQMEQII KDIREFKEKN KVDKVVVLWT ANTERYSNVS VGLNDTMENL LASVDKNEAE ISPSTLYAIA CVMEGVPFIN GSPQNTFVPG LIDLAIKNNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVSSN AILYEPGEHP DHVVVIKYVP YVGDSKRAMD
401: EYTSEIFMGG KSTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQLKAEGE DKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALAKQRAMLE NIMRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.