Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G134900.1
TraesCS4A01G038500.2
TraesCS4B01G267200.1
TraesCS4D01G266700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G39800.1 TraesCS1A01G134900.1 AT2G22240.1 21798944
AT4G39800.1 TraesCS4A01G038500.2 AT2G22240.1 21798944
AT4G39800.1 TraesCS4B01G267200.1 AT2G22240.1 21798944
AT4G39800.1 TraesCS4D01G266700.1 AT2G22240.1 21798944
AT4G39800.1 TraesCS1A01G134900.1 AT4G39800.1 21798944
AT4G39800.1 TraesCS4A01G038500.2 AT4G39800.1 21798944
AT4G39800.1 TraesCS4B01G267200.1 AT4G39800.1 21798944
AT4G39800.1 TraesCS4D01G266700.1 AT4G39800.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G266700.1 Wheat cytosol 97.13 99.61
TraesCS4B01G267200.1 Wheat cytosol 97.13 99.61
Os03t0192700-01 Rice cytosol 93.69 96.08
KXG39973 Sorghum cytosol 93.5 95.88
Zm00001d037652_P001 Maize cytosol 37.09 93.72
Zm00001d048201_P002 Maize cytosol 93.12 93.65
Zm00001d028180_P002 Maize cytosol 92.73 93.27
HORVU4Hr1G071730.1 Barley cytosol 90.63 91.33
Solyc04g050820.1.1 Tomato cytosol 51.24 90.54
VIT_07s0031g00920.t01 Wine grape cytosol 87.76 90.0
PGSC0003DMT400071770 Potato cytosol 87.19 89.41
Solyc05g051850.2.1 Tomato cytosol 86.81 89.02
KRG97599 Soybean cytosol 86.62 88.82
Solyc04g054740.2.1 Tomato cytosol 86.62 88.82
CDX69385 Canola cytosol 86.62 88.82
CDY13774 Canola cytosol 86.42 88.63
Bra011830.1-P Field mustard cytosol 86.42 88.63
Bra038538.1-P Field mustard cytosol 86.42 88.63
PGSC0003DMT400056192 Potato cytosol 86.42 88.63
KRH59387 Soybean cytosol 86.42 88.63
CDX76938 Canola cytosol 86.23 88.43
KRH31274 Soybean cytosol 85.85 88.04
CDY25580 Canola cytosol 85.66 87.84
Bra030253.1-P Field mustard cytosol 85.66 87.84
AT2G22240.1 Thale cress cytosol 85.47 87.65
CDY68048 Canola cytosol 75.53 87.58
GSMUA_Achr1P21570_001 Banana cytosol 85.09 87.25
CDX89446 Canola cytosol 85.09 87.25
Bra009054.1-P Field mustard cytosol 30.59 86.96
CDY40084 Canola cytosol 84.7 86.86
AT4G39800.1 Thale cress cytosol 84.7 86.69
AT5G10170.1 Thale cress cytosol 84.51 86.67
Bra028596.1-P Field mustard cytosol 84.32 86.47
GSMUA_AchrUn_... Banana cytosol 84.32 86.47
CDX85773 Canola cytosol 84.32 86.47
Zm00001d036866_P001 Maize cytosol 35.56 80.87
KRH43221 Soybean cytosol 80.69 80.23
TraesCS1A01G134900.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 19.89 80.0
CDX69858 Canola cytosol 40.34 79.62
Zm00001d023601_P002 Maize golgi, plasma membrane 42.64 78.25
Zm00001d045455_P001 Maize cytosol 56.41 75.64
GSMUA_AchrUn_... Banana cytosol 86.04 73.77
CDX96980 Canola cytosol 33.84 72.24
Solyc04g050810.1.1 Tomato cytosol 28.11 67.43
Solyc04g050860.1.1 Tomato cytosol 31.55 63.71
Protein Annotations
KEGG:00521+5.5.1.4KEGG:00562+5.5.1.4MapMan:3.13.3.2.1Gene3D:3.30.360.10Gene3D:3.40.50.720GO:GO:0003674
GO:GO:0003824GO:GO:0004512GO:GO:0005975GO:GO:0006021GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0008654GO:GO:0009058GO:GO:0009987InterPro:Myo-inos-1-P_SynthaseInterPro:Myo-inos-1-P_Synthase_GAPDH
InterPro:NAD(P)-bd_dom_sfPFAM:PF01658PFAM:PF07994PIRSF:PIRSF015578PANTHER:PTHR11510PANTHER:PTHR11510:SF13
SUPFAM:SSF51735SUPFAM:SSF55347EnsemblPlantsGene:TraesCS4A01G038500EnsemblPlants:TraesCS4A01G038500.2::
Description
No Description!
Coordinates
chr4A:-:30556765..30560482
Molecular Weight (calculated)
57646.0 Da
IEP (calculated)
5.144
GRAVY (calculated)
-0.169
Length
523 amino acids
Sequence
(BLAST)
001: MFIESFRVES PNVRYGAGEI ESEYRYDTTE LVHESHDGAS KWVVRPKSVN YHFKTNTTVP KLGVMLVGWG GNNGSTLMAG VIANRDVSFE ADGEFNQFRG
101: ISWATKDKVQ QANYFGSLTQ ASTIRVGSYN GEEIYAPFKS LLPMVNPDDL VFGGWDISSM NLADAMTRAK VLDIDLQKQL RPYMESIVPL PGIYDPDFIA
201: ANQGSRANNV IKGTKKEQME QIIKDIREFK EKNKVDKVVV LWTANTERYS NVSVGLNDTM ENLLASVDKN EAEISPSTLY AIACVMEGVP FINGSPQNTF
301: VPGLIDLAIK NNCLIGGDDF KSGQTKMKSV LVDFLVGAGI KPTSIVSYNH LGNNDGMNLS APQTFRSKEI SKSNVVDDMV SSNAILYEPG EHPDHVVVIK
401: YVPYVGDSKR AMDEYTSEIF MGGKSTIVLH NTCEDSLLAA PIILDLVLLA ELSTRIQLKA EGEDKFHSFH PVATILSYLT KAPLVPPGTP VVNALAKQRA
501: MLENIMRACV GLAPENNMIL EYK
Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)
001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK
Arabidopsis Description
IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.