Factsheet for TraesCS1A01G134900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

peroxisome 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G134900.1
TraesCS4A01G038500.2
TraesCS4B01G267200.1
TraesCS4D01G266700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	TraesCS1A01G134900.1	AT2G22240.1	21798944
AT4G39800.1	TraesCS4A01G038500.2	AT2G22240.1	21798944
AT4G39800.1	TraesCS4B01G267200.1	AT2G22240.1	21798944
AT4G39800.1	TraesCS4D01G266700.1	AT2G22240.1	21798944
AT4G39800.1	TraesCS1A01G134900.1	AT4G39800.1	21798944
AT4G39800.1	TraesCS4A01G038500.2	AT4G39800.1	21798944
AT4G39800.1	TraesCS4B01G267200.1	AT4G39800.1	21798944
AT4G39800.1	TraesCS4D01G266700.1	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009054.1-P	Field mustard	cytosol	55.38	39.13
CDX96980	Canola	cytosol	66.15	35.1
Solyc04g050820.1.1	Tomato	cytosol	74.62	32.77
CDX69858	Canola	cytosol	62.31	30.57
CDY68048	Canola	cytosol	78.46	22.62
Os10t0369900-01	Rice	plastid	83.08	21.22
OQU91879	Sorghum	cytosol	81.54	20.78
Zm00001d014292_P001	Maize	cytosol	81.54	20.78
KRH59387	Soybean	cytosol	80.77	20.59
KRG97599	Soybean	cytosol	80.77	20.59
Zm00001d030506_P001	Maize	cytosol	81.54	20.54
PGSC0003DMT400071770	Potato	cytosol	80.0	20.39
Solyc04g054740.2.1	Tomato	cytosol	80.0	20.39
KRH31274	Soybean	cytosol	80.0	20.39
VIT_07s0031g00920.t01	Wine grape	cytosol	80.0	20.39
AT5G10170.1	Thale cress	cytosol	79.23	20.2
GSMUA_Achr1P21570_001	Banana	cytosol	79.23	20.2
KRH43221	Soybean	cytosol	81.54	20.15
PGSC0003DMT400056192	Potato	cytosol	78.46	20.0
CDY25580	Canola	cytosol	78.46	20.0
GSMUA_AchrUn_...	Banana	cytosol	78.46	20.0
Solyc05g051850.2.1	Tomato	cytosol	78.46	20.0
CDY13774	Canola	cytosol	78.46	20.0
CDX89446	Canola	cytosol	78.46	20.0
CDX76938	Canola	cytosol	78.46	20.0
CDX69385	Canola	cytosol	78.46	20.0
Bra038538.1-P	Field mustard	cytosol	78.46	20.0
Bra030253.1-P	Field mustard	cytosol	78.46	20.0
Bra011830.1-P	Field mustard	cytosol	78.46	20.0
AT2G22240.1	Thale cress	cytosol	78.46	20.0
AT4G39800.1	Thale cress	cytosol	78.46	19.96
TraesCS4A01G038500.2	Wheat	cytosol	80.0	19.89
CDY40084	Canola	cytosol	77.69	19.8
CDX85773	Canola	cytosol	77.69	19.8
Bra028596.1-P	Field mustard	cytosol	77.69	19.8
GSMUA_AchrUn_...	Banana	cytosol	80.0	17.05
Solyc04g050810.1.1	Tomato	cytosol	3.85	2.29
Solyc04g050860.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	Gene3D:3.30.360.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01658	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	SUPFAM:SSF51735	SUPFAM:SSF55347	EnsemblPlantsGene:TraesCS1A01G134900
EnsemblPlants:TraesCS1A01G134900.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:205224199..205224771

Molecular Weight (calculated)

14505.3 Da

IEP (calculated)

4.437

GRAVY (calculated)

-0.063

Length

130 amino acids

Sequence
(BLAST)

001: MKSVLVDFLF GVGIKPTSIA SYNHQGNNDD MNLSATQIFS SKEISKSGMV HDMVVSNDIF YNPEEHPDDV IVIKYMSYVG DSKRAMDEYS SEIFMGGKNT
101: TVLHNTREDS LLVAPIILDL VLLAELDTRI

Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.