CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85773	Canola	cytosol	99.41	99.41
AT5G10170.1	Thale cress	cytosol	95.49	95.49
CDX69385	Canola	cytosol	90.59	90.59
CDY13774	Canola	cytosol	90.59	90.59
CDX76938	Canola	cytosol	90.39	90.39
PGSC0003DMT400071770	Potato	cytosol	90.39	90.39
CDY25580	Canola	cytosol	90.0	90.0
CDX69858	Canola	cytosol	46.67	89.81
Solyc04g054740.2.1	Tomato	cytosol	89.8	89.8
VIT_07s0031g00920.t01	Wine grape	cytosol	89.8	89.8
Solyc05g051850.2.1	Tomato	cytosol	89.61	89.61
KRH59387	Soybean	cytosol	89.61	89.61
CDX89446	Canola	cytosol	89.41	89.41
CDY68048	Canola	cytosol	79.02	89.36
PGSC0003DMT400056192	Potato	cytosol	89.02	89.02
Zm00001d037652_P001	Maize	cytosol	35.88	88.41
KRG97599	Soybean	cytosol	87.65	87.65
KRH31274	Soybean	cytosol	87.45	87.45
Solyc04g050820.1.1	Tomato	cytosol	50.59	87.16
KXG39973	Sorghum	cytosol	87.06	87.06
TraesCS4D01G266700.1	Wheat	cytosol	87.06	87.06
TraesCS4B01G267200.1	Wheat	cytosol	86.86	86.86
GSMUA_Achr1P21570_001	Banana	cytosol	86.86	86.86
Os03t0192700-01	Rice	cytosol	86.47	86.47
GSMUA_AchrUn_...	Banana	cytosol	86.08	86.08
Zm00001d028180_P002	Maize	cytosol	87.06	85.38
Zm00001d048201_P002	Maize	cytosol	86.47	84.81
TraesCS4A01G038500.2	Wheat	cytosol	86.86	84.7
Os10t0369900-01	Rice	plastid	83.14	83.3
CDX96980	Canola	cytosol	40.0	83.27
Zm00001d014292_P001	Maize	cytosol	81.76	81.76
OQU91879	Sorghum	cytosol	80.98	80.98
Zm00001d030506_P001	Maize	cytosol	81.76	80.81
KRH43221	Soybean	cytosol	83.14	80.61
HORVU4Hr1G071730.1	Barley	cytosol	81.37	79.96
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.8	77.69
Zm00001d036866_P001	Maize	cytosol	34.51	76.52
Solyc04g050810.1.1	Tomato	cytosol	31.18	72.94
GSMUA_AchrUn_...	Banana	cytosol	86.47	72.3
Zm00001d023601_P002	Maize	golgi, plasma membrane	39.8	71.23
Zm00001d045455_P001	Maize	cytosol	53.92	70.51
Solyc04g050860.1.1	Tomato	cytosol	31.96	62.93

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:A0A078HS25
UniProt:A0A078HS25	EnsemblPlants:CDY40084	ProteinID:CDY40084	ProteinID:CDY40084.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00068996001	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13
MetaCyc:PWY-2301	MetaCyc:PWY-4661	MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664	SUPFAM:SSF51735
SUPFAM:SSF55347	UniPathway:UPA00823	UniParc:UPI0004EC48BE	:	:	:

Description

BnaC02g00460DBnaC02g00460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS25]

Coordinates

chrLK032463:-:112505..115945

Molecular Weight (calculated)

56317.5 Da

IEP (calculated)

5.659

GRAVY (calculated)

-0.195

Length

510 amino acids

Sequence
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHESKNGAY QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMGRAKVLD IDLQKQLRPF MEHMVPLPGI YDPDFIAANQ GSRANHLIKG
201: TKKEQLEQVI KDIRDFKEKN KVDKVVVLWT ANTERYSNVA AGLNDTTENL MSSLDKNEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNS
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFESGEHP DHVVVIKYVP YVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIELKADNE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT5G10170.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK

Arabidopsis Description

IPS3Probable inositol 3-phosphate synthase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.