Factsheet for Solyc04g050820.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g050810.1.1
Solyc04g050820.1.1
Solyc04g050860.1.1
Solyc04g054740.2.1
Solyc05g051850.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	Solyc04g050810.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050810.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT4G39800.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037652_P001	Maize	cytosol	60.47	86.47
Bra009054.1-P	Field mustard	cytosol	46.62	75.0
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.77	74.62
Zm00001d036866_P001	Maize	cytosol	57.43	73.91
CDX69858	Canola	cytosol	51.01	56.98
PGSC0003DMT400071770	Potato	cytosol	95.27	55.29
Solyc04g054740.2.1	Tomato	cytosol	94.59	54.9
Solyc05g051850.2.1	Tomato	cytosol	91.22	52.94
KRH59387	Soybean	cytosol	91.22	52.94
KRG97599	Soybean	cytosol	91.22	52.94
TraesCS4B01G267200.1	Wheat	cytosol	90.54	52.55
TraesCS4D01G266700.1	Wheat	cytosol	90.54	52.55
KRH31274	Soybean	cytosol	90.54	52.55
KXG39973	Sorghum	cytosol	90.2	52.35
VIT_07s0031g00920.t01	Wine grape	cytosol	89.86	52.16
Os03t0192700-01	Rice	cytosol	89.53	51.96
CDY13774	Canola	cytosol	88.51	51.37
CDY25580	Canola	cytosol	88.51	51.37
Bra011830.1-P	Field mustard	cytosol	88.51	51.37
Bra038538.1-P	Field mustard	cytosol	88.51	51.37
Bra030253.1-P	Field mustard	cytosol	88.51	51.37
TraesCS4A01G038500.2	Wheat	cytosol	90.54	51.24
CDX69385	Canola	cytosol	88.18	51.18
CDX76938	Canola	cytosol	88.18	51.18
Zm00001d028180_P002	Maize	cytosol	89.86	51.15
AT2G22240.1	Thale cress	cytosol	87.84	50.98
CDX89446	Canola	cytosol	87.84	50.98
AT5G10170.1	Thale cress	cytosol	87.5	50.78
Zm00001d048201_P002	Maize	cytosol	89.19	50.77
CDX85773	Canola	cytosol	87.16	50.59
Bra028596.1-P	Field mustard	cytosol	87.16	50.59
GSMUA_AchrUn_...	Banana	cytosol	87.16	50.59
CDY40084	Canola	cytosol	87.16	50.59
GSMUA_Achr1P21570_001	Banana	cytosol	86.82	50.39
AT4G39800.1	Thale cress	cytosol	86.82	50.29
Zm00001d045455_P001	Maize	cytosol	66.22	50.26
Os10t0369900-01	Rice	plastid	85.14	49.51
Zm00001d023601_P002	Maize	golgi, plasma membrane	47.64	49.47
Zm00001d014292_P001	Maize	cytosol	84.46	49.02
CDX96980	Canola	cytosol	40.2	48.57
OQU91879	Sorghum	cytosol	83.11	48.24
Zm00001d030506_P001	Maize	cytosol	83.78	48.06
CDY68048	Canola	cytosol	69.93	45.9
HORVU4Hr1G071730.1	Barley	cytosol	80.41	45.86
KRH43221	Soybean	cytosol	81.42	45.82
GSMUA_AchrUn_...	Banana	cytosol	87.16	42.3
Solyc04g050860.1.1	Tomato	cytosol	22.97	26.25
Solyc04g050810.1.1	Tomato	cytosol	3.04	4.13

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:50.5.5	GO:GO:0003674
GO:GO:0003824	GO:GO:0004512	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008654
GO:GO:0009058	GO:GO:0009987	UniProt:K4BS46	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	SUPFAM:SSF51735
SUPFAM:SSF55347	EnsemblPlantsGene:Solyc04g050820.1	EnsemblPlants:Solyc04g050820.1.1	UniParc:UPI0002766DC3	:	:

Description

No Description!

Coordinates

chr4:+:48497166..48498888

Molecular Weight (calculated)

32628.5 Da

IEP (calculated)

5.364

GRAVY (calculated)

0.079

Length

296 amino acids

Sequence
(BLAST)

001: MRAWQFKENN KVDKVVVLWT ANTERYSSVV VGLNDTMENL FASVDRNEAE ISPSTLYAIA CILENVPFIN GSPQNTFVPG LIDLAIKRNT LIGGDDFKSG
101: QTKMKSVLVY FLVGPTSIVS YNHLGNTDGM NLSAPQTFCS KEISKSNVVD DMVSSNAILY EPGEHPDHVV VIKYVPYVGD SKRAMDEYTS EIFMGGRNTI
201: VLHNTCEDSL LAAPIILDLV LLAEISIRIQ LKAEGEGKFH SFHPVATILT YLTKAPLVPP GTPMVIALSK QRAMLENILR ACVGLALENN MILEYK

Best Arabidopsis Sequence Match ( AT4G39800.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYETTE VVHEKTVNGT YQWIVKPKTV KYDFKTDIRV PKLGVMLVGL GGNNGSTLTA GVIANKEGIS WATKDKVQQA
101: NYFGSLTQAS SIRVGSFNGE EIYAPFKSLL PMVNPDDVVF GGWDISDMNL ADAMARARVL DIDLQKQLRP YMENIVPLPG IFDPDFIAAN QGSRANHVIK
201: GTKKEQVDHI IKDMREFKEK NKVDKVVVLW TANTERYSNV VVGMNDTMEN LMESVDRDEA EISPSTLYAI ACVLEGIPFI NGSPQNTFVP GLIDMAIRNN
301: VLIGGDDFKS GQTKMKSVLV DFLVGAGIKP TSIVSYNHLG NNDGMNLSAP QTFRSKEISK SNVVDDMVAS NGILFEPGEH PDHVVVIKYV PYVADSKRAM
401: DEYTSEIFMG GKNTIVMHNT CEDSLLAAPI ILDLVLLAEL STRIQFKSEG EGKFHSFHPV ATILSYLTKA PLVPPGTPVI NALSKQRAML ENIMRACVGL
501: APENNMIMEF K

Arabidopsis Description

IPS1Inositol-3-phosphate synthase isozyme 1 [Source:UniProtKB/Swiss-Prot;Acc:P42801]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.