Factsheet for Solyc05g051850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g050810.1.1
Solyc04g050820.1.1
Solyc04g050860.1.1
Solyc04g054740.2.1
Solyc05g051850.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	Solyc04g050810.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050810.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT4G39800.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056192	Potato	cytosol	98.82	98.82
Solyc04g054740.2.1	Tomato	cytosol	92.94	92.94
KRG97599	Soybean	cytosol	92.75	92.75
KRH31274	Soybean	cytosol	92.55	92.55
Bra009054.1-P	Field mustard	cytosol	33.33	92.39
VIT_07s0031g00920.t01	Wine grape	cytosol	92.35	92.35
KRH59387	Soybean	cytosol	91.76	91.76
Solyc04g050820.1.1	Tomato	cytosol	52.94	91.22
Bra038538.1-P	Field mustard	cytosol	90.39	90.39
CDY13774	Canola	cytosol	90.39	90.39
CDX69385	Canola	cytosol	90.2	90.2
CDX76938	Canola	cytosol	90.2	90.2
Bra011830.1-P	Field mustard	cytosol	89.8	89.8
CDY25580	Canola	cytosol	89.61	89.61
CDY40084	Canola	cytosol	89.61	89.61
Bra030253.1-P	Field mustard	cytosol	89.41	89.41
KXG39973	Sorghum	cytosol	89.41	89.41
CDX85773	Canola	cytosol	89.41	89.41
Bra028596.1-P	Field mustard	cytosol	89.41	89.41
TraesCS4D01G266700.1	Wheat	cytosol	89.22	89.22
CDX89446	Canola	cytosol	89.22	89.22
TraesCS4B01G267200.1	Wheat	cytosol	89.02	89.02
Os03t0192700-01	Rice	cytosol	89.02	89.02
Zm00001d037652_P001	Maize	cytosol	36.08	88.89
AT4G39800.1	Thale cress	cytosol	89.02	88.85
AT5G10170.1	Thale cress	cytosol	88.82	88.82
CDY68048	Canola	cytosol	78.43	88.69
AT2G22240.1	Thale cress	cytosol	88.63	88.63
GSMUA_Achr1P21570_001	Banana	cytosol	87.65	87.65
GSMUA_AchrUn_...	Banana	cytosol	87.25	87.25
CDX69858	Canola	cytosol	45.29	87.17
Zm00001d028180_P002	Maize	cytosol	88.82	87.12
TraesCS4A01G038500.2	Wheat	cytosol	89.02	86.81
Zm00001d048201_P002	Maize	cytosol	88.24	86.54
KRH43221	Soybean	cytosol	85.69	83.08
Os10t0369900-01	Rice	plastid	82.75	82.91
Zm00001d014292_P001	Maize	cytosol	81.76	81.76
OQU91879	Sorghum	cytosol	81.57	81.57
HORVU4Hr1G071730.1	Barley	cytosol	82.55	81.12
Zm00001d030506_P001	Maize	cytosol	81.57	80.62
CDX96980	Canola	cytosol	38.04	79.18
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.0	78.46
Zm00001d036866_P001	Maize	cytosol	35.29	78.26
Solyc04g050810.1.1	Tomato	cytosol	32.35	75.69
Zm00001d023601_P002	Maize	golgi, plasma membrane	41.57	74.39
GSMUA_AchrUn_...	Banana	cytosol	88.04	73.61
Zm00001d045455_P001	Maize	cytosol	55.29	72.31
Solyc04g050860.1.1	Tomato	cytosol	34.12	67.18

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:GO:0003674
GO:GO:0003824	GO:GO:0004512	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008654
GO:GO:0009058	GO:GO:0009987	UniProt:K4C1L6	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	SUPFAM:SSF51735
SUPFAM:SSF55347	EnsemblPlantsGene:Solyc05g051850.2	EnsemblPlants:Solyc05g051850.2.1	UniParc:UPI0002765911	:	:

Description

No Description!

Coordinates

chr5:+:62262886..62266976

Molecular Weight (calculated)

56565.1 Da

IEP (calculated)

5.374

GRAVY (calculated)

-0.160

Length

510 amino acids

Sequence
(BLAST)

001: MFIENFKVES PNVKYIENEI HSVYDYETTE LVHEERNGTY QWIVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTGG VIANREGISW ATKEKVQQAN
101: YFGSLTQAST IRVGSFNGEE IYAPFKSLLP MVNPDDVVFG GWDISNMNLA DAMVRAKVFE VDLQKQLRPY MESMVPLPGI YDPDFIAANQ EARANNVIKG
201: TKKEQVEQIV KDIREFKEKN KVDKIVVLWT ANTERYSNVV VGLNDTMENL LAAVDRNEAE ISPSTLHAIA CIMENVPFIN GSPQNTFVPG LIDLAIKRNT
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN AILYESGEHP DHVVVIKYVP YVGDSKRAMD
401: EYMSEIFMGG KSTIVMHNTC EDSLLAAPII LDLVLLAELS TRIQLKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NIMRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT5G10170.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK

Arabidopsis Description

IPS3Probable inositol 3-phosphate synthase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.