Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
20213122
|
plastid:
27992503
|
gfp PMID:
20213122
doi
Plant Molecular and Cellular Genetics, Bose Institute (Centenary Campus), Kolkata, India.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0192700-01 | |
| Os10t0369900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G39800.1 | Os03t0192700-01 | AT2G22240.1 | 21798944 |
| AT4G39800.1 | Os10t0369900-01 | AT2G22240.1 | 21798944 |
| AT4G39800.1 | Os03t0192700-01 | AT4G39800.1 | 21798944 |
| AT4G39800.1 | Os10t0369900-01 | AT4G39800.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014292_P001 | Maize | cytosol | 89.19 | 89.02 |
| OQU91879 | Sorghum | cytosol | 88.41 | 88.24 |
| Zm00001d030506_P001 | Maize | cytosol | 89.39 | 88.18 |
| Os03t0192700-01 | Rice | cytosol | 87.23 | 87.06 |
| Solyc04g050820.1.1 | Tomato | cytosol | 49.51 | 85.14 |
| VIT_07s0031g00920.t01 | Wine grape | cytosol | 84.87 | 84.71 |
| Bra009054.1-P | Field mustard | cytosol | 30.45 | 84.24 |
| Bra038538.1-P | Field mustard | cytosol | 83.89 | 83.73 |
| CDY13774 | Canola | cytosol | 83.89 | 83.73 |
| CDX76938 | Canola | cytosol | 83.69 | 83.53 |
| Bra030253.1-P | Field mustard | cytosol | 83.5 | 83.33 |
| AT2G22240.1 | Thale cress | cytosol | 83.3 | 83.14 |
| KRH59387 | Soybean | cytosol | 83.3 | 83.14 |
| CDY40084 | Canola | cytosol | 83.3 | 83.14 |
| CDY25580 | Canola | cytosol | 83.3 | 83.14 |
| Bra011830.1-P | Field mustard | cytosol | 83.3 | 83.14 |
| CDX69385 | Canola | cytosol | 83.3 | 83.14 |
| Bra028596.1-P | Field mustard | cytosol | 83.3 | 83.14 |
| TraesCS1A01G134900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 21.22 | 83.08 |
| CDX85773 | Canola | cytosol | 83.1 | 82.94 |
| PGSC0003DMT400071770 | Potato | cytosol | 83.1 | 82.94 |
| AT5G10170.1 | Thale cress | cytosol | 83.1 | 82.94 |
| Solyc05g051850.2.1 | Tomato | cytosol | 82.91 | 82.75 |
| KRG97599 | Soybean | cytosol | 82.71 | 82.55 |
| Solyc04g054740.2.1 | Tomato | cytosol | 82.71 | 82.55 |
| PGSC0003DMT400056192 | Potato | cytosol | 82.51 | 82.35 |
| CDX89446 | Canola | cytosol | 82.51 | 82.35 |
| GSMUA_Achr1P21570_001 | Banana | cytosol | 82.32 | 82.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 82.12 | 81.96 |
| CDY68048 | Canola | cytosol | 72.5 | 81.82 |
| KRH31274 | Soybean | cytosol | 81.73 | 81.57 |
| AT4G39800.1 | Thale cress | cytosol | 81.34 | 81.02 |
| CDX69858 | Canola | cytosol | 39.69 | 76.23 |
| KRH43221 | Soybean | cytosol | 77.6 | 75.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 82.91 | 69.18 |
| CDX96980 | Canola | cytosol | 32.22 | 66.94 |
| Solyc04g050810.1.1 | Tomato | cytosol | 26.13 | 61.01 |
| Solyc04g050860.1.1 | Tomato | cytosol | 29.47 | 57.92 |
Protein Annotations
| KEGG:00521+5.5.1.4 | KEGG:00562+5.5.1.4 | MapMan:3.13.3.2.1 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | EntrezGene:4348467 |
| ProteinID:AAM08827.1 | ProteinID:AAP53373.1 | ProteinID:BAF26368.1 | ProteinID:BAT10553.1 | ncoils:Coil | ProteinID:EAZ15847.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004512 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006021 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008654 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016853 | InterPro:Myo-inos-1-P_Synthase | InterPro:Myo-inos-1-P_Synthase_GAPDH |
| InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os10g0369900 | EnsemblPlants:Os10t0369900-01 | PFAM:PF01658 | PFAM:PF07994 | PIRSF:PIRSF015578 |
| PANTHER:PTHR11510 | PANTHER:PTHR11510:SF13 | UniProt:Q8S5N2 | SUPFAM:SSF51735 | SUPFAM:SSF55347 | UniParc:UPI000009D26E |
| RefSeq:XP_015614733.1 | : | : | : | : | : |
Description
INOSITOL 1-PHOSPHATE SYNTHASE-2Similar to Myo-inositol-1-phosphate synthase. (Os10t0369900-01)
Coordinates
chr10:+:11624392..11629513
Molecular Weight (calculated)
56018.3 Da
IEP (calculated)
6.366
GRAVY (calculated)
-0.210
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVEGFRVES PRVRYGDGEI ESEYRYDTTE VVAPPSPEKG WVVRPKSVTY HFKTTTTVPK LGVMLVGWGG NNGTTLTAGV IANREGISWA TKEKVHKANY
101: FGSLTQSSTI RVGSYNGEEI YAPFKSLVPM VNPNDIVFGG WDISSMNLAD AMTRARVLDI DLQKQLRHHM ESMVPLPGVY NPDFIAANQG SRANNVIKGT
201: KKEQVEQVKK DIREFKEKSK VDKVVVLWTA NTERYSNVVA GMNDTMDNLL ASLDKDEPEM SPSTLYAIAC VMEGVPFING SPQNTFVPGL IELAIKKNSV
301: IGGDDFKSGQ TKMKSVLVDF LVGAGIKPTS IASYNHLGNN DGMNLSAPQT FRSKEISKSG VVDDMVSSNA ILYEPGEHPD HVIVIKYIPY VGDSKRAMDE
401: YTSEIFMGGK NTIVLHNTCE DSLLAAPIIL DLVLLAELST RIQLKAEDQD KYHSFHPVAT ILSYLSKAPL VPPGTPVVNA LAKQRAMLEN ILRACVGLAP
501: ENNMMLEYK
101: FGSLTQSSTI RVGSYNGEEI YAPFKSLVPM VNPNDIVFGG WDISSMNLAD AMTRARVLDI DLQKQLRHHM ESMVPLPGVY NPDFIAANQG SRANNVIKGT
201: KKEQVEQVKK DIREFKEKSK VDKVVVLWTA NTERYSNVVA GMNDTMDNLL ASLDKDEPEM SPSTLYAIAC VMEGVPFING SPQNTFVPGL IELAIKKNSV
301: IGGDDFKSGQ TKMKSVLVDF LVGAGIKPTS IASYNHLGNN DGMNLSAPQT FRSKEISKSG VVDDMVSSNA ILYEPGEHPD HVIVIKYIPY VGDSKRAMDE
401: YTSEIFMGGK NTIVLHNTCE DSLLAAPIIL DLVLLAELST RIQLKAEDQD KYHSFHPVAT ILSYLSKAPL VPPGTPVVNA LAKQRAMLEN ILRACVGLAP
501: ENNMMLEYK
001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK
Arabidopsis Description
IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.