CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030253.1-P	Field mustard	cytosol	99.41	99.41
CDX89446	Canola	cytosol	98.43	98.43
CDX76938	Canola	cytosol	97.45	97.45
CDY13774	Canola	cytosol	97.45	97.45
AT2G22240.1	Thale cress	cytosol	95.88	95.88
CDX69385	Canola	cytosol	94.12	94.12
CDY68048	Canola	cytosol	82.35	93.13
VIT_07s0031g00920.t01	Wine grape	cytosol	90.39	90.39
PGSC0003DMT400071770	Potato	cytosol	90.0	90.0
CDY40084	Canola	cytosol	90.0	90.0
Zm00001d037652_P001	Maize	cytosol	36.47	89.86
PGSC0003DMT400056192	Potato	cytosol	89.8	89.8
CDX85773	Canola	cytosol	89.8	89.8
Solyc05g051850.2.1	Tomato	cytosol	89.61	89.61
Solyc04g054740.2.1	Tomato	cytosol	89.41	89.41
KRH59387	Soybean	cytosol	89.22	89.22
KRG97599	Soybean	cytosol	89.02	89.02
Solyc04g050820.1.1	Tomato	cytosol	51.37	88.51
GSMUA_Achr1P21570_001	Banana	cytosol	88.43	88.43
TraesCS4D01G266700.1	Wheat	cytosol	88.04	88.04
KRH31274	Soybean	cytosol	88.04	88.04
TraesCS4B01G267200.1	Wheat	cytosol	87.84	87.84
KXG39973	Sorghum	cytosol	87.84	87.84
Os03t0192700-01	Rice	cytosol	87.45	87.45
GSMUA_AchrUn_...	Banana	cytosol	87.25	87.25
CDX69858	Canola	cytosol	44.71	86.04
Zm00001d028180_P002	Maize	cytosol	87.65	85.96
TraesCS4A01G038500.2	Wheat	cytosol	87.84	85.66
Zm00001d048201_P002	Maize	cytosol	87.06	85.38
Os10t0369900-01	Rice	plastid	83.14	83.3
Zm00001d014292_P001	Maize	cytosol	81.37	81.37
OQU91879	Sorghum	cytosol	80.78	80.78
KRH43221	Soybean	cytosol	82.94	80.42
Zm00001d030506_P001	Maize	cytosol	81.18	80.23
HORVU4Hr1G071730.1	Barley	cytosol	81.57	80.15
CDX96980	Canola	cytosol	37.84	78.78
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.0	78.46
Zm00001d036866_P001	Maize	cytosol	34.71	76.96
GSMUA_AchrUn_...	Banana	cytosol	88.04	73.61
Zm00001d023601_P002	Maize	golgi, plasma membrane	40.59	72.63
Solyc04g050810.1.1	Tomato	cytosol	30.78	72.02
Zm00001d045455_P001	Maize	cytosol	54.51	71.28
Solyc04g050860.1.1	Tomato	cytosol	32.75	64.48

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:A0A078GGM6
UniProt:A0A078GGM6	EnsemblPlants:CDY25580	ProteinID:CDY25580	ProteinID:CDY25580.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00032843001	InterPro:Myo-inos-1-P_Synthase
InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510
PANTHER:PTHR11510:SF13	MetaCyc:PWY-2301	MetaCyc:PWY-4661	MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664
SUPFAM:SSF51735	SUPFAM:SSF55347	UniPathway:UPA00823	UniParc:UPI0004EF19CE	:	:

Description

BnaA04g12720DBnaA04g12720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGM6]

Coordinates

chrLK032177:-:15343..17606

Molecular Weight (calculated)

56219.4 Da

IEP (calculated)

5.232

GRAVY (calculated)

-0.156

Length

510 amino acids

Sequence
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYETTE VVHENRNGSY QWIVKPKTVQ YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDGVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPDDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MEHMVPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKVVVLWT ANTERYSDVV VGLNDTMENL LASVEKNESE ISPSTLYAIA CVLEGVPFIN GSPQNTFVPG LIELAISRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELS TRIQFGAKGE GKYHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.