CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97599
KRH31274
KRH43221
KRH59387

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	KRG97599	AT2G22240.1	21798944
AT4G39800.1	KRH31274	AT2G22240.1	21798944
AT4G39800.1	KRH43221	AT2G22240.1	21798944
AT4G39800.1	KRH59387	AT2G22240.1	21798944
AT4G39800.1	KRG97599	AT4G39800.1	21798944
AT4G39800.1	KRH31274	AT4G39800.1	21798944
AT4G39800.1	KRH43221	AT4G39800.1	21798944
AT4G39800.1	KRH59387	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31274	Soybean	cytosol	98.63	98.63
KRH59387	Soybean	cytosol	95.88	95.88
Solyc05g051850.2.1	Tomato	cytosol	92.75	92.75
VIT_07s0031g00920.t01	Wine grape	cytosol	92.35	92.35
PGSC0003DMT400056192	Potato	cytosol	92.16	92.16
PGSC0003DMT400071770	Potato	cytosol	91.96	91.96
Zm00001d037652_P001	Maize	cytosol	37.25	91.79
Solyc04g054740.2.1	Tomato	cytosol	91.37	91.37
Bra009054.1-P	Field mustard	cytosol	32.94	91.3
Solyc04g050820.1.1	Tomato	cytosol	52.94	91.22
CDX69385	Canola	cytosol	89.41	89.41
Bra038538.1-P	Field mustard	cytosol	89.41	89.41
Bra011830.1-P	Field mustard	cytosol	89.41	89.41
CDY13774	Canola	cytosol	89.41	89.41
CDX76938	Canola	cytosol	89.22	89.22
TraesCS4D01G266700.1	Wheat	cytosol	89.02	89.02
CDY25580	Canola	cytosol	89.02	89.02
KXG39973	Sorghum	cytosol	88.82	88.82
TraesCS4B01G267200.1	Wheat	cytosol	88.82	88.82
Bra030253.1-P	Field mustard	cytosol	88.82	88.82
Os03t0192700-01	Rice	cytosol	88.43	88.43
CDY68048	Canola	cytosol	78.04	88.25
CDX89446	Canola	cytosol	88.24	88.24
AT2G22240.1	Thale cress	cytosol	88.24	88.24
AT5G10170.1	Thale cress	cytosol	88.04	88.04
AT4G39800.1	Thale cress	cytosol	88.04	87.87
GSMUA_Achr1P21570_001	Banana	cytosol	87.84	87.84
CDY40084	Canola	cytosol	87.65	87.65
Bra028596.1-P	Field mustard	cytosol	87.45	87.45
CDX85773	Canola	cytosol	87.45	87.45
GSMUA_AchrUn_...	Banana	cytosol	87.06	87.06
Zm00001d028180_P002	Maize	cytosol	88.43	86.73
TraesCS4A01G038500.2	Wheat	cytosol	88.82	86.62
KRH43221	Soybean	cytosol	89.22	86.5
Zm00001d048201_P002	Maize	cytosol	87.65	85.96
CDX69858	Canola	cytosol	43.92	84.53
Os10t0369900-01	Rice	plastid	82.55	82.71
Zm00001d014292_P001	Maize	cytosol	81.37	81.37
HORVU4Hr1G071730.1	Barley	cytosol	82.35	80.92
OQU91879	Sorghum	cytosol	80.78	80.78
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.59	80.77
Zm00001d030506_P001	Maize	cytosol	81.37	80.43
Zm00001d036866_P001	Maize	cytosol	36.08	80.0
CDX96980	Canola	cytosol	36.86	76.73
Zm00001d023601_P002	Maize	golgi, plasma membrane	42.16	75.44
Solyc04g050810.1.1	Tomato	cytosol	31.96	74.77
GSMUA_AchrUn_...	Banana	cytosol	88.63	74.1
Zm00001d045455_P001	Maize	cytosol	54.9	71.79
Solyc04g050860.1.1	Tomato	cytosol	33.14	65.25

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	EntrezGene:106797152	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720
ProteinID:ABC55420.1	EMBL:ACUP02010802	EnsemblPlantsGene:GLYMA_18G018600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004512
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006021
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987
EnsemblPlants:KRG97599	ProteinID:KRG97599	ProteinID:KRG97599.1	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	MetaCyc:PWY-2301
MetaCyc:PWY-4661	MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664	UniProt:Q2MJR5	SUPFAM:SSF51735
SUPFAM:SSF55347	UniParc:UPI000067C8CD	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:1365145..1368075

Molecular Weight (calculated)

56447.7 Da

IEP (calculated)

5.222

GRAVY (calculated)

-0.158

Length

510 amino acids

Sequence
(BLAST)

001: MFIENFKVES PNVKYTETEI QSVYNYETTE LVHENRNGTY QWIVKPKSVN YQFKTNTHVP KLGVMLVGWG GNNGSTLTGG VIANREGISW ATKDKIQQAN
101: YFGSLTQASA IRVGSFQGEE IYAPFKSLLP MVNPDDIVFG GWDISNMNLA DAMARAKVFD IDLQKQLRPY MESMVPLPGI YDPDFIAANQ EERANNVIKG
201: TKQEQVQQII KDIKAFKEAT KVDKVVVLWT ANTERYSNLV VGLNDTMENL LAAVDRNEAE ISPSTLYAIA CVMENVPFIN GSPQNTFVPG LIDLAIARNT
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVNSN AILYEPGEHP DHVVVIKYVP YVGDSKRAMD
401: EYTSEIFMGG KNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAENE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NIMRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.