CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97599
KRH31274
KRH43221
KRH59387

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	KRG97599	AT2G22240.1	21798944
AT4G39800.1	KRH31274	AT2G22240.1	21798944
AT4G39800.1	KRH43221	AT2G22240.1	21798944
AT4G39800.1	KRH59387	AT2G22240.1	21798944
AT4G39800.1	KRG97599	AT4G39800.1	21798944
AT4G39800.1	KRH31274	AT4G39800.1	21798944
AT4G39800.1	KRH43221	AT4G39800.1	21798944
AT4G39800.1	KRH59387	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97599	Soybean	cytosol	95.88	95.88
KRH31274	Soybean	cytosol	95.69	95.69
VIT_07s0031g00920.t01	Wine grape	cytosol	93.33	93.33
PGSC0003DMT400071770	Potato	cytosol	93.14	93.14
Solyc04g054740.2.1	Tomato	cytosol	92.55	92.55
Bra009054.1-P	Field mustard	cytosol	33.14	91.85
Solyc05g051850.2.1	Tomato	cytosol	91.76	91.76
Solyc04g050820.1.1	Tomato	cytosol	52.94	91.22
Zm00001d037652_P001	Maize	cytosol	36.86	90.82
PGSC0003DMT400056192	Potato	cytosol	90.78	90.78
CDY13774	Canola	cytosol	90.2	90.2
Bra011830.1-P	Field mustard	cytosol	90.2	90.2
CDX69385	Canola	cytosol	90.2	90.2
Bra038538.1-P	Field mustard	cytosol	90.2	90.2
CDX76938	Canola	cytosol	90.0	90.0
KRH43221	Soybean	cytosol	92.75	89.92
AT5G10170.1	Thale cress	cytosol	89.61	89.61
CDY40084	Canola	cytosol	89.61	89.61
CDX85773	Canola	cytosol	89.41	89.41
Bra028596.1-P	Field mustard	cytosol	89.41	89.41
CDY25580	Canola	cytosol	89.22	89.22
KXG39973	Sorghum	cytosol	89.22	89.22
AT2G22240.1	Thale cress	cytosol	89.02	89.02
Bra030253.1-P	Field mustard	cytosol	89.02	89.02
CDY68048	Canola	cytosol	78.63	88.91
TraesCS4D01G266700.1	Wheat	cytosol	88.82	88.82
TraesCS4B01G267200.1	Wheat	cytosol	88.63	88.63
CDX89446	Canola	cytosol	88.63	88.63
AT4G39800.1	Thale cress	cytosol	88.43	88.26
Os03t0192700-01	Rice	cytosol	88.04	88.04
GSMUA_AchrUn_...	Banana	cytosol	87.84	87.84
GSMUA_Achr1P21570_001	Banana	cytosol	87.65	87.65
Zm00001d028180_P002	Maize	cytosol	88.63	86.92
TraesCS4A01G038500.2	Wheat	cytosol	88.63	86.42
CDX69858	Canola	cytosol	44.9	86.42
Zm00001d048201_P002	Maize	cytosol	88.04	86.35
Os10t0369900-01	Rice	plastid	83.14	83.3
Zm00001d014292_P001	Maize	cytosol	82.55	82.55
OQU91879	Sorghum	cytosol	81.76	81.76
Zm00001d030506_P001	Maize	cytosol	82.55	81.59
HORVU4Hr1G071730.1	Barley	cytosol	82.35	80.92
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.59	80.77
Zm00001d036866_P001	Maize	cytosol	36.08	80.0
CDX96980	Canola	cytosol	37.65	78.37
Solyc04g050810.1.1	Tomato	cytosol	32.55	76.15
Zm00001d023601_P002	Maize	golgi, plasma membrane	41.96	75.09
GSMUA_AchrUn_...	Banana	cytosol	88.63	74.1
Zm00001d045455_P001	Maize	cytosol	55.29	72.31
Solyc04g050860.1.1	Tomato	cytosol	33.33	65.64

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	EntrezGene:100800820	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720
EMBL:ACUP02003318	EnsemblPlantsGene:GLYMA_05G180600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004512	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	UniProt:I1K4L3
EnsemblPlants:KRH59387	ProteinID:KRH59387	ProteinID:KRH59387.1	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf
PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	MetaCyc:PWY-2301
MetaCyc:PWY-4661	MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664	SUPFAM:SSF51735	SUPFAM:SSF55347
UniParc:UPI0002339F70	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:36870768..36875196

Molecular Weight (calculated)

56423.7 Da

IEP (calculated)

5.525

GRAVY (calculated)

-0.160

Length

510 amino acids

Sequence
(BLAST)

001: MFIESFKVES PNVKYTETEI QSVYNYETTE LVHENKNGTY QWVVKPKTVK YEFKTNTHVP KLGVMLVGWG GNNGSTLTGG VIANREGISW ATKDKIQQAN
101: YFGSLTQASA IRVGSFQGEV IYAPFKSLLP MVNPDDVVFG GWDISNLNLA DAMARAKVFD IDLQKQLRPY MESMVPLPGI YDPDFIAANQ GDRANNVIKG
201: TKKEQVQQII KDIKEFKEST KVDKVVVLWT ANTERYSNLV VGLNDTMENL FASLDRNEAE ISPSTLYAIA CVMENVPFIN GSPQNTFVPG LIDLAIKRNS
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVNSN AILYEPGEHP DHVVVIKYVP YVGDSKRAMD
401: EYTSEIFMGG KNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIEFKAENE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT5G10170.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK

Arabidopsis Description

IPS3Probable inositol 3-phosphate synthase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.