Factsheet for PGSC0003DMT400056192

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400056192
PGSC0003DMT400071770

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	PGSC0003DMT400056192	AT2G22240.1	21798944
AT4G39800.1	PGSC0003DMT400071770	AT2G22240.1	21798944
AT4G39800.1	PGSC0003DMT400056192	AT4G39800.1	21798944
AT4G39800.1	PGSC0003DMT400071770	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g051850.2.1	Tomato	cytosol	98.82	98.82
PGSC0003DMT400071770	Potato	cytosol	93.14	93.14
Bra009054.1-P	Field mustard	cytosol	33.33	92.39
KRG97599	Soybean	cytosol	92.16	92.16
KRH31274	Soybean	cytosol	91.96	91.96
VIT_07s0031g00920.t01	Wine grape	cytosol	91.76	91.76
KRH59387	Soybean	cytosol	90.78	90.78
Bra038538.1-P	Field mustard	cytosol	90.59	90.59
CDY13774	Canola	cytosol	90.59	90.59
CDX76938	Canola	cytosol	90.39	90.39
CDX69385	Canola	cytosol	90.2	90.2
Bra011830.1-P	Field mustard	cytosol	89.8	89.8
CDY25580	Canola	cytosol	89.8	89.8
Bra030253.1-P	Field mustard	cytosol	89.61	89.61
CDX89446	Canola	cytosol	89.41	89.41
KXG39973	Sorghum	cytosol	89.02	89.02
CDY40084	Canola	cytosol	89.02	89.02
CDX85773	Canola	cytosol	88.82	88.82
TraesCS4D01G266700.1	Wheat	cytosol	88.82	88.82
Bra028596.1-P	Field mustard	cytosol	88.82	88.82
AT2G22240.1	Thale cress	cytosol	88.82	88.82
CDY68048	Canola	cytosol	78.43	88.69
AT4G39800.1	Thale cress	cytosol	88.82	88.65
Os03t0192700-01	Rice	cytosol	88.63	88.63
TraesCS4B01G267200.1	Wheat	cytosol	88.63	88.63
Zm00001d037652_P001	Maize	cytosol	35.88	88.41
AT5G10170.1	Thale cress	cytosol	88.24	88.24
GSMUA_Achr1P21570_001	Banana	cytosol	87.25	87.25
GSMUA_AchrUn_...	Banana	cytosol	86.86	86.86
CDX69858	Canola	cytosol	45.1	86.79
Zm00001d028180_P002	Maize	cytosol	88.43	86.73
TraesCS4A01G038500.2	Wheat	cytosol	88.63	86.42
Zm00001d048201_P002	Maize	cytosol	88.04	86.35
Os10t0369900-01	Rice	plastid	82.35	82.51
KRH43221	Soybean	cytosol	84.71	82.13
Zm00001d014292_P001	Maize	cytosol	81.76	81.76
OQU91879	Sorghum	cytosol	81.37	81.37
Zm00001d030506_P001	Maize	cytosol	81.76	80.81
HORVU4Hr1G071730.1	Barley	cytosol	82.16	80.73
CDX96980	Canola	cytosol	37.84	78.78
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.0	78.46
Zm00001d036866_P001	Maize	cytosol	35.29	78.26
Zm00001d023601_P002	Maize	golgi, plasma membrane	41.18	73.68
GSMUA_AchrUn_...	Banana	cytosol	87.65	73.28
Zm00001d045455_P001	Maize	cytosol	54.9	71.79

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	EntrezGene:102577590	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720
ProteinID:AAK26439	ProteinID:AAK26439.1	EMBL:AF357837	GO:GO:0003674	GO:GO:0003824	GO:GO:0004512
GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008654
GO:GO:0009058	GO:GO:0009987	GO:GO:0016853	UniProt:M1BZ42	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658	PFAM:PF07994	EnsemblPlantsGene:PGSC0003DMG400021831	PGSC:PGSC0003DMG400021831	EnsemblPlants:PGSC0003DMT400056192
PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	SUPFAM:SSF51735	SUPFAM:SSF55347	UniParc:UPI0002963887
RefSeq:XP_006366522.1	:	:	:	:	:

Description

Inositol-3-phosphate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400021831]

Coordinates

chr5:+:47095027..47099299

Molecular Weight (calculated)

56565.0 Da

IEP (calculated)

5.371

GRAVY (calculated)

-0.169

Length

510 amino acids

Sequence
(BLAST)

001: MFIENFKVES PNVKYIENEI HSVYDYETTE LVHEERNGTY QWIVKPKSVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTGG VIANREGISW ATKEKVQQAN
101: YFGSLTQAST IRIGSYNGEE IYAPFKSLLP MVNPDDVVFG GWDISNMNLA DAMVRAKVFE VDLQKQLRPY MESMVPLPGI YDPDFIAANQ EARANNVIKG
201: TKKEQVDQIV KDIREFKEKN KVDKIVVLWT ANTERYSNVV VGLNDTMENL LAAVDRNEAE ISPSTLHAIA CILENVPFIN GSPQNTFVPG LIDLAIKRNT
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN SILYESGEHP DHVVVIKYVP YVGDSKRAMD
401: EYMSEIFMGG KSTIVMHNTC EDSLLAAPII LDLVLLAELS TRIQLKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NIMRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT2G22240.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.