CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX69385
CDX76938
CDX89446
CDX96980
CDY13774
CDY25580
CDY68048

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	CDX76938	AT2G22240.1	21798944
AT4G39800.1	CDX89446	AT2G22240.1	21798944
AT4G39800.1	CDY13774	AT2G22240.1	21798944
AT4G39800.1	CDY25580	AT2G22240.1	21798944
AT4G39800.1	CDX69385	AT4G39800.1	21798944
AT4G39800.1	CDX96980	AT4G39800.1	21798944
AT4G39800.1	CDY68048	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69385	Canola	cytosol	98.89	87.45
AT4G39800.1	Thale cress	cytosol	95.57	84.34
CDX76938	Canola	cytosol	93.79	82.94
CDY13774	Canola	cytosol	93.79	82.94
CDY25580	Canola	cytosol	93.13	82.35
CDX89446	Canola	cytosol	92.68	81.96
CDY40084	Canola	cytosol	89.36	79.02
CDX85773	Canola	cytosol	89.14	78.82
VIT_07s0031g00920.t01	Wine grape	cytosol	88.91	78.63
PGSC0003DMT400071770	Potato	cytosol	88.91	78.63
KRH59387	Soybean	cytosol	88.91	78.63
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.62	78.46
Solyc05g051850.2.1	Tomato	cytosol	88.69	78.43
PGSC0003DMT400056192	Potato	cytosol	88.69	78.43
Solyc04g054740.2.1	Tomato	cytosol	88.25	78.04
KRG97599	Soybean	cytosol	88.25	78.04
TraesCS4D01G266700.1	Wheat	cytosol	87.8	77.65
TraesCS4B01G267200.1	Wheat	cytosol	87.58	77.45
KRH31274	Soybean	cytosol	87.36	77.25
KXG39973	Sorghum	cytosol	87.36	77.25
Os03t0192700-01	Rice	cytosol	87.14	77.06
KRH43221	Soybean	cytosol	88.91	76.24
GSMUA_AchrUn_...	Banana	cytosol	86.03	76.08
GSMUA_Achr1P21570_001	Banana	cytosol	85.81	75.88
HORVU4Hr1G071730.1	Barley	cytosol	86.92	75.53
TraesCS4A01G038500.2	Wheat	cytosol	87.58	75.53
Zm00001d028180_P002	Maize	cytosol	86.7	75.19
Zm00001d048201_P002	Maize	cytosol	86.7	75.19
CDX96980	Canola	cytosol	40.58	74.69
Os10t0369900-01	Rice	plastid	81.82	72.5
Solyc04g050810.1.1	Tomato	cytosol	34.59	71.56
Zm00001d014292_P001	Maize	cytosol	80.49	71.18
Zm00001d037652_P001	Maize	cytosol	32.37	70.53
OQU91879	Sorghum	cytosol	79.38	70.2
Zm00001d030506_P001	Maize	cytosol	80.27	70.16
Solyc04g050820.1.1	Tomato	cytosol	45.9	69.93
CDX69858	Canola	cytosol	38.36	65.28
GSMUA_AchrUn_...	Banana	cytosol	86.7	64.1
Solyc04g050860.1.1	Tomato	cytosol	36.36	63.32
Zm00001d045455_P001	Maize	cytosol	50.33	58.21
Zm00001d036866_P001	Maize	cytosol	28.38	55.65
Zm00001d023601_P002	Maize	golgi, plasma membrane	34.81	55.09

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720	GO:A0A078JKI9
UniProt:A0A078JKI9	EnsemblPlants:CDY68048	ProteinID:CDY68048	ProteinID:CDY68048.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00069156001	InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH
InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658	PFAM:PF07994	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13
MetaCyc:PWY-2301	MetaCyc:PWY-4661	MetaCyc:PWY-6372	MetaCyc:PWY-6580	MetaCyc:PWY-6664	SUPFAM:SSF51735
SUPFAM:SSF55347	UniPathway:UPA00823	UniParc:UPI0004EE22A5	:	:	:

Description

BnaA01g34710DBnaA01g34710D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JKI9]

Coordinates

chrLK036802:+:4904..7275

Molecular Weight (calculated)

49866.5 Da

IEP (calculated)

4.643

GRAVY (calculated)

-0.188

Length

451 amino acids

Sequence
(BLAST)

001: MFIESFKVES PNVKYTENEI QSVYDYETTE VVHENVNGAY QWIVKPKVVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLVP MVNPDDVVFG GWDISDMNLA DAMGRAKVLD IDLQKQLRPY MENIVPLPGI YDPDFIAANQ GSRANNVING
201: TKKEQVDQII KDMREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTMENL MNSVDRDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIDLAIKNNV
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELS TRIQFKSEKE V

Best Arabidopsis Sequence Match ( AT2G22240.3 )
(BLAST)

001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE VCIPLVSYQE TRDW

Arabidopsis Description

IPS2Inositol-3-phosphate synthase isozyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38862]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.