Factsheet for PGSC0003DMT400071770

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400056192
PGSC0003DMT400071770

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	PGSC0003DMT400056192	AT2G22240.1	21798944
AT4G39800.1	PGSC0003DMT400071770	AT2G22240.1	21798944
AT4G39800.1	PGSC0003DMT400056192	AT4G39800.1	21798944
AT4G39800.1	PGSC0003DMT400071770	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g054740.2.1	Tomato	cytosol	99.41	99.41
Solyc04g050820.1.1	Tomato	cytosol	55.29	95.27
PGSC0003DMT400056192	Potato	cytosol	93.14	93.14
KRH59387	Soybean	cytosol	93.14	93.14
VIT_07s0031g00920.t01	Wine grape	cytosol	92.75	92.75
KRG97599	Soybean	cytosol	91.96	91.96
Bra009054.1-P	Field mustard	cytosol	33.14	91.85
KRH31274	Soybean	cytosol	91.57	91.57
Zm00001d037652_P001	Maize	cytosol	36.86	90.82
Bra038538.1-P	Field mustard	cytosol	90.78	90.78
CDX69385	Canola	cytosol	90.78	90.78
CDY13774	Canola	cytosol	90.78	90.78
CDX76938	Canola	cytosol	90.59	90.59
CDY40084	Canola	cytosol	90.39	90.39
AT5G10170.1	Thale cress	cytosol	90.39	90.39
Bra011830.1-P	Field mustard	cytosol	90.2	90.2
CDY25580	Canola	cytosol	90.0	90.0
Bra030253.1-P	Field mustard	cytosol	89.8	89.8
KXG39973	Sorghum	cytosol	89.8	89.8
Bra028596.1-P	Field mustard	cytosol	89.8	89.8
AT2G22240.1	Thale cress	cytosol	89.8	89.8
CDX85773	Canola	cytosol	89.8	89.8
TraesCS4D01G266700.1	Wheat	cytosol	89.61	89.61
CDX89446	Canola	cytosol	89.41	89.41
TraesCS4B01G267200.1	Wheat	cytosol	89.41	89.41
AT4G39800.1	Thale cress	cytosol	89.41	89.24
Os03t0192700-01	Rice	cytosol	89.02	89.02
CDY68048	Canola	cytosol	78.63	88.91
GSMUA_Achr1P21570_001	Banana	cytosol	88.04	88.04
GSMUA_AchrUn_...	Banana	cytosol	87.65	87.65
Zm00001d028180_P002	Maize	cytosol	89.22	87.5
TraesCS4A01G038500.2	Wheat	cytosol	89.41	87.19
Zm00001d048201_P002	Maize	cytosol	88.82	87.12
CDX69858	Canola	cytosol	44.71	86.04
KRH43221	Soybean	cytosol	86.67	84.03
Os10t0369900-01	Rice	plastid	82.94	83.1
Solyc04g050810.1.1	Tomato	cytosol	35.49	83.03
HORVU4Hr1G071730.1	Barley	cytosol	83.14	81.7
Zm00001d014292_P001	Maize	cytosol	81.57	81.57
OQU91879	Sorghum	cytosol	80.78	80.78
Zm00001d030506_P001	Maize	cytosol	81.37	80.43
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.39	80.0
Zm00001d036866_P001	Maize	cytosol	35.88	79.57
CDX96980	Canola	cytosol	37.65	78.37
Zm00001d023601_P002	Maize	golgi, plasma membrane	42.55	76.14
GSMUA_AchrUn_...	Banana	cytosol	88.82	74.26
Zm00001d045455_P001	Maize	cytosol	56.08	73.33
Solyc04g050860.1.1	Tomato	cytosol	36.27	71.43

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	EntrezGene:102598817	MapMan:3.13.3.2.1	Gene3D:3.30.360.10	Gene3D:3.40.50.720
GO:GO:0003674	GO:GO:0003824	GO:GO:0004512	GO:GO:0005975	GO:GO:0006021	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058	GO:GO:0009987	UniProt:M1CP96
InterPro:Myo-inos-1-P_Synthase	InterPro:Myo-inos-1-P_Synthase_GAPDH	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01658	PFAM:PF07994	EnsemblPlantsGene:PGSC0003DMG400027916
PGSC:PGSC0003DMG400027916	EnsemblPlants:PGSC0003DMT400071770	PIRSF:PIRSF015578	PANTHER:PTHR11510	PANTHER:PTHR11510:SF13	SUPFAM:SSF51735
SUPFAM:SSF55347	UniParc:UPI00029511A1	RefSeq:XP_006366474.1	SEG:seg	:	:

Description

Inositol-3-phosphate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400027916]

Coordinates

chr4:-:51913243..51916631

Molecular Weight (calculated)

56342.5 Da

IEP (calculated)

5.362

GRAVY (calculated)

-0.162

Length

510 amino acids

Sequence
(BLAST)

001: MFIENFKVES PNVKYTESEI HSVYDYQTTE LVHEEKNGTF QWTVKPKTVK YEFKTDVHVP KLGVMLVGWG GNNGSALTGG VIANREGISW ATKDKVQQAN
101: YFGSLTQAST IRVGSFNGEE IYAPFKSILP MVNPDDVVFG GWDISNMNLA DAMARAKVFD IDLQKQLRPY MESMVPLPGI YDPDFIAANQ GSRANNVIKG
201: TKKEQIDQII KDIREFKENN KVDKVVVLWT ANTERYSSVA VGLNDTMENL FASVDRNEAE ISPSTLYAIA CILENVPFIN GSPQNTFVPG LIDLAIKRNT
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVSSN AILYEPGEHP DHVVVIKYVP YVGDSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQLKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMILEYK

Best Arabidopsis Sequence Match ( AT5G10170.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK

Arabidopsis Description

IPS3Probable inositol 3-phosphate synthase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.