Factsheet for Solyc04g050810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g050810.1.1
Solyc04g050820.1.1
Solyc04g050860.1.1
Solyc04g054740.2.1
Solyc05g051850.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	Solyc04g050810.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050810.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT4G39800.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g050860.1.1	Tomato	cytosol	54.59	45.95
PGSC0003DMT400071770	Potato	cytosol	83.03	35.49
Solyc04g054740.2.1	Tomato	cytosol	82.57	35.29
CDY68048	Canola	cytosol	71.56	34.59
KRH59387	Soybean	cytosol	76.15	32.55
Solyc05g051850.2.1	Tomato	cytosol	75.69	32.35
VIT_07s0031g00920.t01	Wine grape	cytosol	75.23	32.16
KRG97599	Soybean	cytosol	74.77	31.96
KRH31274	Soybean	cytosol	74.77	31.96
AT5G10170.1	Thale cress	cytosol	73.39	31.37
CDX76938	Canola	cytosol	72.94	31.18
CDY40084	Canola	cytosol	72.94	31.18
CDY13774	Canola	cytosol	72.94	31.18
CDX85773	Canola	cytosol	72.94	31.18
Bra038538.1-P	Field mustard	cytosol	72.94	31.18
KRH43221	Soybean	cytosol	74.77	30.99
Bra028596.1-P	Field mustard	cytosol	72.48	30.98
CDY25580	Canola	cytosol	72.02	30.78
CDX69385	Canola	cytosol	72.02	30.78
AT2G22240.1	Thale cress	cytosol	72.02	30.78
AT4G39800.1	Thale cress	cytosol	72.02	30.72
Bra011830.1-P	Field mustard	cytosol	71.56	30.59
Bra030253.1-P	Field mustard	cytosol	71.56	30.59
CDX89446	Canola	cytosol	71.56	30.59
GSMUA_Achr1P21570_001	Banana	cytosol	70.18	30.0
GSMUA_AchrUn_...	Banana	cytosol	68.81	29.41
KXG39973	Sorghum	cytosol	68.81	29.41
TraesCS4D01G266700.1	Wheat	cytosol	67.89	29.02
Os03t0192700-01	Rice	cytosol	67.43	28.82
TraesCS4B01G267200.1	Wheat	cytosol	67.43	28.82
Zm00001d028180_P002	Maize	cytosol	67.89	28.46
HORVU4Hr1G071730.1	Barley	cytosol	67.43	28.32
Zm00001d048201_P002	Maize	cytosol	67.43	28.27
TraesCS4A01G038500.2	Wheat	cytosol	67.43	28.11
Os10t0369900-01	Rice	plastid	61.01	26.13
CDX96980	Canola	cytosol	28.9	25.71
GSMUA_AchrUn_...	Banana	cytosol	70.64	25.25
Zm00001d014292_P001	Maize	cytosol	58.72	25.1
OQU91879	Sorghum	cytosol	58.26	24.9
Zm00001d030506_P001	Maize	cytosol	58.72	24.81
Zm00001d023601_P002	Maize	golgi, plasma membrane	28.44	21.75
CDX69858	Canola	cytosol	26.15	21.51
Zm00001d045455_P001	Maize	cytosol	29.36	16.41
Bra009054.1-P	Field mustard	cytosol	11.01	13.04
Zm00001d036866_P001	Maize	cytosol	5.05	4.78
Zm00001d037652_P001	Maize	cytosol	4.13	4.35
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	2.29	3.85
Solyc04g050820.1.1	Tomato	cytosol	4.13	3.04

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004512	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058
GO:GO:0009987	UniProt:K4BS45	InterPro:Myo-inos-1-P_Synthase	InterPro:NAD(P)-bd_dom_sf	PFAM:PF07994	PANTHER:PTHR11510
PANTHER:PTHR11510:SF13	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc04g050810.1	EnsemblPlants:Solyc04g050810.1.1	UniParc:UPI0002766DC2	:

Description

No Description!

Coordinates

chr4:+:48486409..48487717

Molecular Weight (calculated)

24800.1 Da

IEP (calculated)

4.635

GRAVY (calculated)

-0.412

Length

218 amino acids

Sequence
(BLAST)

001: MFIENFKVES PNVKYTESEI QSVYDYQTTD LVHEEKNETF QWTVKPKTVK YEFKTIVHGY ACWMGGNNGS ALSGGVIANR EGISWATKDV QQANYFGSLT
101: QASTIQVGSF NGQEIYASFK SILPMVKLIH PDDVVFGEWD ISNMNLADDM ARANVFDIDL QKKLRPYMES MVPFPGIYDP DFITANQGSR ANNVIKGTDR
201: IYSFTQQVMN QVPYYTNE

Best Arabidopsis Sequence Match ( AT5G10170.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYQTTE LVHENKNGAF QWTVKPKTVK YEFKTDTHVP KLGVMLVGWG GNNGSTLTAG VIANREGISW ATKEKVQQAN
101: YFGSLTQASS IRVGSFNGEE IYAPFKSLLP MVNPEEIVFG GWDISDMNLA DAMARAKVLD IDLQKQMRPF MEHMVPLPGI FDPDFIAANQ GSRANHVIKG
201: TKKQQLEQVI KDIREFKEKN KVDKVVVLWT ANTERYSNVV VGLNDTTENL MSSLDKDEAE ISPSTLYAIA CVLENVPFIN GSPQNTFVPG LIELAIKRNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVGSN GILYEPGEHP DHVVVIKYVP CVGDSKRAMD
401: EYTSEIFMGG KNTIVMHNTC EDSLLAAPII LDLVLLAELT TRIQFMSENE GKFHSFHPVA TLLSYLSKAP LVPPGTPVVN ALSKQRAMLE NVLRACVGLA
501: PENNMILEYK

Arabidopsis Description

IPS3Probable inositol 3-phosphate synthase isozyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX12]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.