Factsheet for Solyc04g050860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g050810.1.1
Solyc04g050820.1.1
Solyc04g050860.1.1
Solyc04g054740.2.1
Solyc05g051850.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39800.1	Solyc04g050810.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT2G22240.1	21798944
AT4G39800.1	Solyc04g050810.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050820.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g050860.1.1	AT4G39800.1	21798944
AT4G39800.1	Solyc04g054740.2.1	AT4G39800.1	21798944
AT4G39800.1	Solyc05g051850.2.1	AT4G39800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g050810.1.1	Tomato	cytosol	45.95	54.59
CDY68048	Canola	cytosol	63.32	36.36
PGSC0003DMT400071770	Potato	cytosol	71.43	36.27
Solyc04g054740.2.1	Tomato	cytosol	71.04	36.08
Solyc05g051850.2.1	Tomato	cytosol	67.18	34.12
KRH59387	Soybean	cytosol	65.64	33.33
KRG97599	Soybean	cytosol	65.25	33.14
KRH31274	Soybean	cytosol	64.86	32.94
GSMUA_Achr1P21570_001	Banana	cytosol	64.48	32.75
CDY25580	Canola	cytosol	64.48	32.75
KXG39973	Sorghum	cytosol	64.48	32.75
KRH43221	Soybean	cytosol	66.41	32.7
Os03t0192700-01	Rice	cytosol	64.09	32.55
CDX89446	Canola	cytosol	64.09	32.55
Bra030253.1-P	Field mustard	cytosol	64.09	32.55
TraesCS4B01G267200.1	Wheat	cytosol	64.09	32.55
TraesCS4D01G266700.1	Wheat	cytosol	64.09	32.55
VIT_07s0031g00920.t01	Wine grape	cytosol	64.09	32.55
AT4G39800.1	Thale cress	cytosol	64.09	32.49
CDY13774	Canola	cytosol	63.71	32.35
CDX76938	Canola	cytosol	63.71	32.35
Bra038538.1-P	Field mustard	cytosol	63.71	32.35
Bra011830.1-P	Field mustard	cytosol	63.32	32.16
Bra028596.1-P	Field mustard	cytosol	63.32	32.16
CDX85773	Canola	cytosol	63.32	32.16
CDX69385	Canola	cytosol	63.32	32.16
AT5G10170.1	Thale cress	cytosol	62.93	31.96
CDY40084	Canola	cytosol	62.93	31.96
GSMUA_AchrUn_...	Banana	cytosol	62.55	31.76
Zm00001d048201_P002	Maize	cytosol	63.71	31.73
Zm00001d028180_P002	Maize	cytosol	63.71	31.73
HORVU4Hr1G071730.1	Barley	cytosol	63.32	31.6
TraesCS4A01G038500.2	Wheat	cytosol	63.71	31.55
AT2G22240.1	Thale cress	cytosol	61.78	31.37
Zm00001d014292_P001	Maize	cytosol	58.3	29.61
Os10t0369900-01	Rice	plastid	57.92	29.47
OQU91879	Sorghum	cytosol	57.53	29.22
Zm00001d030506_P001	Maize	cytosol	57.92	29.07
Zm00001d045455_P001	Maize	cytosol	41.7	27.69
GSMUA_AchrUn_...	Banana	cytosol	64.48	27.38
Solyc04g050820.1.1	Tomato	cytosol	26.25	22.97
Zm00001d023601_P002	Maize	golgi, plasma membrane	18.53	16.84
Zm00001d037652_P001	Maize	cytosol	12.36	15.46
CDX69858	Canola	cytosol	5.02	4.91
CDX96980	Canola	cytosol	4.25	4.49
Zm00001d036866_P001	Maize	cytosol	1.93	2.17
Bra009054.1-P	Field mustard	cytosol	0.77	1.09
TraesCS1A01G134900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	0.0	0.0

Protein Annotations

KEGG:00521+5.5.1.4	KEGG:00562+5.5.1.4	Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004512	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006021	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008654	GO:GO:0009058
GO:GO:0009987	UniProt:K4BS49	InterPro:Myo-inos-1-P_Synthase	InterPro:NAD(P)-bd_dom_sf	PFAM:PF07994	PANTHER:PTHR11510
PANTHER:PTHR11510:SF13	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc04g050860.1	EnsemblPlants:Solyc04g050860.1.1	UniParc:UPI0002766DC6	SEG:seg

Description

No Description!

Coordinates

chr4:+:48757375..48759515

Molecular Weight (calculated)

28692.5 Da

IEP (calculated)

6.276

GRAVY (calculated)

-0.019

Length

259 amino acids

Sequence
(BLAST)

001: MQTGYACWTG GNNGSALTGG VIANREGISW ATKDVQQANY FGSLTQASTI RVGSFNGQEI YTSFKSILPM VKLIHPDDVV FGEWDISNMN LADDMARANV
101: FDVDLQKQLR PYMESMVPFP GIYDPDFIAV NHSLVSMTLI SLLQTKAHVL TLSSKEPRKI KLIKLLSILG YIREFKENNK VDKVVVLWTA NTKRYSSVVV
201: GFNDTMENLF ASVDRNEAEI SPSTLYAIAG ILENVPFING SPQNTFVPGL IDLAIKRNT

Best Arabidopsis Sequence Match ( AT4G39800.1 )
(BLAST)

001: MFIESFKVES PNVKYTENEI HSVYDYETTE VVHEKTVNGT YQWIVKPKTV KYDFKTDIRV PKLGVMLVGL GGNNGSTLTA GVIANKEGIS WATKDKVQQA
101: NYFGSLTQAS SIRVGSFNGE EIYAPFKSLL PMVNPDDVVF GGWDISDMNL ADAMARARVL DIDLQKQLRP YMENIVPLPG IFDPDFIAAN QGSRANHVIK
201: GTKKEQVDHI IKDMREFKEK NKVDKVVVLW TANTERYSNV VVGMNDTMEN LMESVDRDEA EISPSTLYAI ACVLEGIPFI NGSPQNTFVP GLIDMAIRNN
301: VLIGGDDFKS GQTKMKSVLV DFLVGAGIKP TSIVSYNHLG NNDGMNLSAP QTFRSKEISK SNVVDDMVAS NGILFEPGEH PDHVVVIKYV PYVADSKRAM
401: DEYTSEIFMG GKNTIVMHNT CEDSLLAAPI ILDLVLLAEL STRIQFKSEG EGKFHSFHPV ATILSYLTKA PLVPPGTPVI NALSKQRAML ENIMRACVGL
501: APENNMIMEF K

Arabidopsis Description

IPS1Inositol-3-phosphate synthase isozyme 1 [Source:UniProtKB/Swiss-Prot;Acc:P42801]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.