CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27339	Soybean	cytosol	95.44	94.72
KRH42856	Soybean	nucleus	77.57	78.76
KRH58958	Soybean	endoplasmic reticulum	77.19	78.38
KRH27042	Soybean	nucleus	77.57	78.16
PGSC0003DMT400020200	Potato	cytosol	76.81	77.99
Solyc07g053260.2.1	Tomato	plastid	77.19	77.78
PGSC0003DMT400052619	Potato	cytosol	77.19	77.78
KRH22287	Soybean	nucleus, plasma membrane	76.81	77.39
Solyc12g010860.1.1	Tomato	plastid	76.43	77.01
KRG89486	Soybean	cytosol	71.1	71.92
KRH70879	Soybean	endoplasmic reticulum	70.72	71.81
KRH50527	Soybean	cytosol	70.34	71.43
KRH75027	Soybean	endoplasmic reticulum	70.34	71.43
KRG89721	Soybean	cytosol	19.01	71.43
KRH72385	Soybean	endoplasmic reticulum, nucleus	65.78	66.03
KRH01783	Soybean	nucleus	64.26	65.76
KRH46909	Soybean	cytosol	64.64	65.38
KRH53025	Soybean	cytosol	65.02	61.29
KRH62315	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	66.54	60.76
KRH52909	Soybean	endoplasmic reticulum	57.03	60.0
KRH62193	Soybean	endoplasmic reticulum	56.65	59.6
GSMUA_Achr4P15130_001	Banana	cytosol	53.61	58.02
KRH16772	Soybean	cytosol	66.16	55.41
KRH05108	Soybean	cytosol	26.62	44.03

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100806167	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain
MapMan:35.1	EMBL:ACUP02008374	EMBL:AF228501	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G270600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	EnsemblPlants:KRH21981	ProteinID:KRH21981
ProteinID:KRH21981.1	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00797	PANTHER:PTHR18860
PANTHER:PTHR18860:SF31	UniProt:Q9M5K7	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI000009CA87	:

Description

hypothetical protein

Coordinates

chr13:+:37265741..37269626

Molecular Weight (calculated)

30209.5 Da

IEP (calculated)

4.569

GRAVY (calculated)

-0.545

Length

263 amino acids

Sequence
(BLAST)

001: MATFSKEREN FVYVAKLAEQ AERYDEMVDA MKKVAKLDVE LSVEERNLFS VGYKNVVGSR RASWRILSSI EQKEDSKGNE LHVKHIRDYR NKVELELSNI
101: CSDIMIILDE HLIPSTNIAE STVFYYKMKG DYYRYLAEFK AGNEKKEVAD QSLKAYQTAS TTAESELQPT HPIRLGLALN FSVFYYEILN SPERACHLAK
201: QAFDDAVSEL DTLNEDSYKD STLIMQLLRD NLTLWTSDIP EEGEDLKMES AARVDQGEDE LGR

Best Arabidopsis Sequence Match ( AT1G26480.1 )
(BLAST)

001: MSSSGSDKER ETFVYMAKLS EQAERYDEMV ETMKKVARVN SELTVEERNL LSVGYKNVIG ARRASWRIMS SIEQKEESKG NESNVKQIKG YRQKVEDELA
101: NICQDILTII DQHLIPHATS GEATVFYYKM KGDYYRYLAE FKTEQERKEA AEQSLKGYEA ATQAASTELP STHPIRLGLA LNFSVFYYEI MNSPERACHL
201: AKQAFDEAIA ELDTLSEESY KDSTLIMQLL RDNLTLWTSD LPEDGGEDNI KTEESKQEQA KPADATEN

Arabidopsis Description

GRF12GRF12 [Source:UniProtKB/TrEMBL;Acc:A0A178WJF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.