CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21981	Soybean	cytosol	94.72	95.44
Solyc07g053260.2.1	Tomato	plastid	78.11	79.31
PGSC0003DMT400052619	Potato	cytosol	78.11	79.31
KRH27042	Soybean	nucleus	78.11	79.31
KRH42856	Soybean	nucleus	76.98	78.76
KRH22287	Soybean	nucleus, plasma membrane	77.36	78.54
KRH58958	Soybean	endoplasmic reticulum	76.6	78.38
PGSC0003DMT400020200	Potato	cytosol	75.85	77.61
Solyc12g010860.1.1	Tomato	plastid	75.09	76.25
KRG89721	Soybean	cytosol	19.25	72.86
KRH75027	Soybean	endoplasmic reticulum	70.57	72.2
KRH70879	Soybean	endoplasmic reticulum	70.19	71.81
KRG89486	Soybean	cytosol	69.43	70.77
KRH50527	Soybean	cytosol	69.06	70.66
KRH01783	Soybean	nucleus	63.77	65.76
KRH46909	Soybean	cytosol	63.77	65.0
KRH72385	Soybean	endoplasmic reticulum, nucleus	64.15	64.89
KRH53025	Soybean	cytosol	64.15	60.93
KRH62315	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	64.91	59.72
KRH52909	Soybean	endoplasmic reticulum	56.23	59.6
KRH62193	Soybean	endoplasmic reticulum	55.85	59.2
GSMUA_Achr4P15130_001	Banana	cytosol	52.83	57.61
KRH16772	Soybean	cytosol	64.91	54.78
KRH05108	Soybean	cytosol	26.42	44.03

Protein Annotations

Gene3D:1.20.190.20	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	MapMan:35.1
EntrezGene:547574	EMBL:ACUP02007798	ncoils:Coil	UniProt:E9KNA3	EnsemblPlantsGene:GLYMA_12G229200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0019904	EMBL:HM004356	InterPro:IPR036815	EnsemblPlants:KRH27339
ProteinID:KRH27339	ProteinID:KRH27339.1	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00797
PANTHER:PTHR18860	PANTHER:PTHR18860:SF31	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI0001F72C44	:

Description

hypothetical protein

Coordinates

chr12:-:38919217..38923409

Molecular Weight (calculated)

30494.9 Da

IEP (calculated)

4.573

GRAVY (calculated)

-0.598

Length

265 amino acids

Sequence
(BLAST)

001: MTQPAMATFS KERENFVYVA KLAEQAERYD EMVDAMKKVA KLDVELSVEE RNLFSVGYKN VVGSRRASWR ILSSIEQKEE SKGNELHVKR IRDYRNKVEL
101: ELSNICSDIM IVLDEHLIPS TNIAESTVFY YKMKGDYYRY LAEFKAGNEK KEVADQSLKA YETASTTAES ELQPTHPIRL GLALNFSVFY YEIMNSPERA
201: CHLAKQAFDD AVSDLDTLNE DSYKDSTLIM QLLRDNLTLW TSDIPEEGED QKMESTTRGE DELGR

Best Arabidopsis Sequence Match ( AT1G26480.1 )
(BLAST)

001: MSSSGSDKER ETFVYMAKLS EQAERYDEMV ETMKKVARVN SELTVEERNL LSVGYKNVIG ARRASWRIMS SIEQKEESKG NESNVKQIKG YRQKVEDELA
101: NICQDILTII DQHLIPHATS GEATVFYYKM KGDYYRYLAE FKTEQERKEA AEQSLKGYEA ATQAASTELP STHPIRLGLA LNFSVFYYEI MNSPERACHL
201: AKQAFDEAIA ELDTLSEESY KDSTLIMQLL RDNLTLWTSD LPEDGGEDNI KTEESKQEQA KPADATEN

Arabidopsis Description

GRF12GRF12 [Source:UniProtKB/TrEMBL;Acc:A0A178WJF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.