Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_18s0001g06330.t01 Wine grape extracellular 90.46 91.15
VIT_07s0191g00090.t01 Wine grape cytosol 87.02 89.41
KRH62315 Soybean endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 91.98 83.68
KRH01783 Soybean nucleus 81.68 83.27
KRH16772 Soybean cytosol 99.24 82.8
KRH53025 Soybean cytosol 87.02 81.72
KRH46909 Soybean cytosol 79.01 79.62
KRH52909 Soybean endoplasmic reticulum 69.08 72.4
KRH62193 Soybean endoplasmic reticulum 69.08 72.4
KRG89486 Soybean cytosol 68.7 69.23
KRH50527 Soybean cytosol 67.94 68.73
KRH70879 Soybean endoplasmic reticulum 67.94 68.73
KRH75027 Soybean endoplasmic reticulum 67.94 68.73
KRH27042 Soybean nucleus 67.56 67.82
KRH22287 Soybean nucleus, plasma membrane 67.18 67.43
KRH05108 Soybean cytosol 40.84 67.3
KRH42856 Soybean nucleus 66.41 67.18
KRH58958 Soybean endoplasmic reticulum 66.41 67.18
KRH21981 Soybean cytosol 66.03 65.78
KRH27339 Soybean cytosol 64.89 64.15
KRG89721 Soybean cytosol 16.03 60.0
Protein Annotations
Gene3D:1.20.190.20EntrezGene:100798989InterPro:14-3-3InterPro:14-3-3_CSInterPro:14-3-3_dom_sfInterPro:14-3-3_domain
MapMan:35.1EMBL:ACUP02001204EMBL:BT096871UniProt:C6TGW2ncoils:CoilEnsemblPlantsGene:GLYMA_02G208700
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0019904InterPro:IPR036815EnsemblPlants:KRH72385
ProteinID:KRH72385ProteinID:KRH72385.1PFAM:PF00244PIRSF:PIRSF000868PRINTS:PR00305ScanProsite:PS00796
ScanProsite:PS00797PANTHER:PTHR18860PANTHER:PTHR18860:SF26SMART:SM00101SUPFAM:SSF48445UniParc:UPI00018C707B
Description
hypothetical protein
Coordinates
chr2:+:39388574..39391014
Molecular Weight (calculated)
29355.4 Da
IEP (calculated)
4.391
GRAVY (calculated)
-0.481
Length
262 amino acids
Sequence
(BLAST)
001: MAASAPTPRE EFVYMAKLAE QAERYEEMVE FMEKVSASAE SEELTVEERN LLSVAYKNVI GARRASWRII SSIEQKEESR GNEDHVAVIR DYRSKIEAEL
101: SNICDGILKL LDTRLVPSAA SGDSKVFYLK MKGDYHRYLA EFKTGADRKE AAESTLSAYK AAQDIANTEL PPTHPIRLGL ALNFSVFYYE ILNSPDRACS
201: LAKQAFDEAI AELDTLGEES YKDSTLIMQL LRDNLTLWTS DMQDDGADEI KEAAPKGDGE QN
Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.