Factsheet for VIT_18s0001g06330.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0191g00090.t01	Wine grape	cytosol	92.31	94.12
KRH72385	Soybean	endoplasmic reticulum, nucleus	91.15	90.46
KRH62315	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	95.0	85.76
VIT_14s0006g03230.t01	Wine grape	cytosol	85.0	84.35
KRH53025	Soybean	cytosol	90.0	83.87
VIT_18s0001g07240.t01	Wine grape	cytosol	73.85	76.19
KRH16772	Soybean	cytosol	91.54	75.8
VIT_00s0199g00190.t01	Wine grape	cytosol	71.92	73.91
VIT_18s0001g05720.t01	Wine grape	cytosol	66.54	68.65
VIT_01s0011g00620.t01	Wine grape	cytosol	69.23	67.92
VIT_19s0014g01420.t01	Wine grape	cytosol	67.69	66.67
VIT_10s0003g01240.t01	Wine grape	cytosol	66.54	60.49
VIT_00s0199g00140.t01	Wine grape	cytosol	56.54	25.3

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100257548	wikigene:100257548	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf
InterPro:14-3-3_domain	MapMan:35.1	ProteinID:ACO40495	ProteinID:ACO40495.1	ProteinID:CCB45595	ProteinID:CCB45595.1
ncoils:Coil	UniProt:F6H0X3	EMBL:FJ824803	EMBL:FN595227	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0019904	InterPro:IPR036815	EntrezGene:LOC100257548	wikigene:LOC100257548	PFAM:PF00244
PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796	ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF26
SMART:SM00101	SUPFAM:SSF48445	TIGR:TC57433	UniParc:UPI00015C7D85	ArrayExpress:VIT_18s0001g06330	EnsemblPlantsGene:VIT_18s0001g06330
EnsemblPlants:VIT_18s0001g06330.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr18:+:4742712..4744730

Molecular Weight (calculated)

29345.4 Da

IEP (calculated)

4.401

GRAVY (calculated)

-0.523

Length

260 amino acids

Sequence
(BLAST)

001: MAAAPSAREE NVYMAKLAEQ AERYEEMVEF MEKVSAAVDS EELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG NEDHVAMIRD YRSKIESELS
101: SICDGILKLL DSRLIPSASS GDSKVFYLKM KGDYHRYLAE FKTGAERKEA AESTLTAYKS AQDIANAELA PTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD MQDDGADEIK EAPKRDDEQQ

Best Arabidopsis Sequence Match ( AT1G78300.1 )
(BLAST)

001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ

Arabidopsis Description

GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.