Factsheet for VIT_14s0006g03230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_11s0052g00890.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G38480.1	VIT_11s0052g00890.t01	AT2G18876.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01783	Soybean	nucleus	90.84	92.61
GSMUA_AchrUn_...	Banana	cytosol	45.8	91.6
PGSC0003DMT400062153	Potato	cytosol	90.84	91.54
Solyc03g034180.2.1	Tomato	cytosol	90.08	91.47
Solyc02g063070.2.1	Tomato	plastid	90.46	91.15
GSMUA_AchrUn_...	Banana	cytosol	45.8	90.91
GSMUA_Achr5P23090_001	Banana	cytosol	45.8	90.91
AT5G38480.1	Thale cress	cytosol	86.26	88.63
CDY71290	Canola	cytosol	86.64	88.33
Bra040592.1-P	Field mustard	cytosol	87.79	88.12
CDY51543	Canola	cytosol	87.79	88.12
CDX67405	Canola	cytosol	86.64	87.98
CDY28698	Canola	cytosol	87.4	87.74
Bra028409.1-P	Field mustard	cytosol	86.26	87.6
CDX74521	Canola	cytosol	85.88	87.55
Bra028187.1-P	Field mustard	cytosol	85.88	87.55
CDY01659	Canola	cytosol	85.5	87.16
CDX91996	Canola	cytosol	86.64	86.97
Bra001049.1-P	Field mustard	cytosol	86.64	86.97
KRH46909	Soybean	cytosol	86.26	86.92
AT3G02520.2	Thale cress	cytosol	87.79	86.79
CDX74252	Canola	cytosol	86.26	86.59
PGSC0003DMT400050389	Potato	cytosol	85.11	85.77
VIT_07s0191g00090.t01	Wine grape	cytosol	83.21	85.49
VIT_18s0001g06330.t01	Wine grape	extracellular	84.35	85.0
Os03t0710800-01	Rice	nucleus, plasma membrane	84.35	85.0
AT5G16050.2	Thale cress	cytosol	86.26	84.33
HORVU4Hr1G007370.1	Barley	plasma membrane	83.59	83.91
TraesCS4A01G268700.1	Wheat	cytosol	83.59	83.91
TraesCS4B01G045500.2	Wheat	cytosol	83.59	83.91
TraesCS4D01G046400.2	Wheat	golgi	83.59	83.91
OQU83613	Sorghum	cytosol	82.06	80.83
TraesCS4D01G155900.1	Wheat	plastid	81.68	80.45
Zm00001d053090_P001	Maize	plastid	82.06	80.22
Os11t0546900-01	Rice	plasma membrane	80.53	79.62
TraesCS4A01G151000.2	Wheat	cytosol	81.68	79.26
TraesCS4B01G159900.1	Wheat	cytosol	82.06	78.75
Zm00001d007446_P003	Maize	cytosol	81.3	77.17
VIT_18s0001g07240.t01	Wine grape	cytosol	73.28	76.19
VIT_00s0199g00190.t01	Wine grape	cytosol	70.61	73.12
HORVU4Hr1G043300.1	Barley	cytosol	82.44	72.0
Zm00001d048554_P001	Maize	cytosol	52.67	70.05
VIT_18s0001g05720.t01	Wine grape	cytosol	67.18	69.84
VIT_01s0011g00620.t01	Wine grape	cytosol	67.94	67.17
VIT_19s0014g01420.t01	Wine grape	cytosol	66.79	66.29
Zm00001d021885_P001	Maize	mitochondrion	41.6	66.06
Zm00001d033357_P001	Maize	cytosol	52.67	66.03
Zm00001d007968_P001	Maize	cytosol	51.91	65.07
Zm00001d017434_P001	Maize	cytosol	51.91	65.07
VIT_10s0003g01240.t01	Wine grape	cytosol	66.79	61.19
HORVU4Hr1G031770.1	Barley	cytosol, plastid	33.97	52.05
Zm00001d018856_P001	Maize	cytosol, plastid	57.25	49.67
Zm00001d039042_P001	Maize	cytosol, nucleus, plasma membrane, plastid	57.63	37.1
VIT_00s0199g00140.t01	Wine grape	cytosol	55.34	24.96

Protein Annotations

Gene3D:1.20.190.20	EntrezGene:100259987	wikigene:100259987	InterPro:14-3-3	InterPro:14-3-3_CS	InterPro:14-3-3_dom_sf
InterPro:14-3-3_domain	MapMan:35.1	UniProt:A5C3B4	EMBL:AM480703	ProteinID:CAN81774	ProteinID:CAN81774.1
ProteinID:CCB57731	ProteinID:CCB57731.1	ncoils:Coil	EMBL:FN596245	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005794
GO:GO:0005829	GO:GO:0005886	GO:GO:0006950	GO:GO:0006995	GO:GO:0007154	GO:GO:0008150
GO:GO:0008152	GO:GO:0009409	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605
GO:GO:0009628	GO:GO:0009631	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016036
GO:GO:0019222	GO:GO:0019904	GO:GO:0030312	GO:GO:0050826	GO:GO:0051365	InterPro:IPR036815
EntrezGene:LOC100259987	wikigene:LOC100259987	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ScanProsite:PS00796
ScanProsite:PS00797	PANTHER:PTHR18860	PANTHER:PTHR18860:SF36	SMART:SM00101	SUPFAM:SSF48445	TIGR:TC66224
UniParc:UPI0001524BA4	ArrayExpress:VIT_14s0006g03230	EnsemblPlantsGene:VIT_14s0006g03230	EnsemblPlants:VIT_14s0006g03230.t01	RefSeq:XP_002283492	RefSeq:XP_002283492.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:21820857..21823454

Molecular Weight (calculated)

29541.9 Da

IEP (calculated)

4.445

GRAVY (calculated)

-0.364

Length

262 amino acids

Sequence
(BLAST)

001: MLLTESSREE NVYMAKLAEQ AERYEEMVEF MEKVAKTVEV EELTVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG NEDHVAIIKD YRATIEAELS
101: KICDGILSLL ESHLIPSAVI AESKVFYLKM KGDYHRYLAE FKTGPGRKEA AESTLLAYKS AQDIALAELA PTHPIRLGLA LNFSVFYYEI LNSPDRACNL
201: AKQAFDEAIS ELDTLGEESY KDSTLIMQLL RDNLTLWTSD ITDDAGDDIK EASKRESGEG QP

Best Arabidopsis Sequence Match ( AT3G02520.2 )
(BLAST)

001: MSSSREENVY LAKLAEQAER YEEMVEFMEK VAKTVDTDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVSIIKDYRG KIETELSKIC
101: DGILNLLDSH LVPTASLAES KVFYLKMKGD YHRYLAEFKT GAERKEAAES TLVAYKSAQD IALADLAPTH PIRLGLALNF SVFYYEILNS PDRACSLAKQ
201: AFDEAISELD TLGEESYKDS TLIMQLLRDN LTLWNSDIND EAGGDEIKEA SKHEPEEGKP AETGQ

Arabidopsis Description

GRF714-3-3-like protein GF14 nu [Source:UniProtKB/Swiss-Prot;Acc:Q96300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.